RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MPZP25189 248 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 HCCSP53701 268 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 RPS7P62081 194 aaKnown RBP11.07□□□□□ -0.64
CCDC58-207ENST00000498466 RPL23AP62750 156 aaKnown RBP11.07□□□□□ -0.64
CCDC58-207ENST00000498466 MICAQ29983 383 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 NKAPLQ5M9Q1 402 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 KCTD18Q6PI47 426 aaPredicted RBP11.07□□□□□ -0.64
CCDC58-207ENST00000498466 ANGPTL5Q86XS5 388 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 TPRX1Q8N7U7 411 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 ASCL2Q99929 193 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 NIPSNAP1Q9BPW8 284 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 MROQ9BYG7 248 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 VNN3Q9NY84 501 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 SAMHD1Q9Y3Z3 626 aaKnown RBP11.07□□□□□ -0.64
CCDC58-207ENST00000498466 LINC00312Q9Y6C7 94 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
CCDC58-207ENST00000498466 DLGAP1O14490 977 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 PRODHO43272 600 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 MYCNOSP40205 109 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 IL24Q13007 206 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 DEGS2Q6QHC5 323 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 OR2W3Q7Z3T1 314 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 TRAPPC6BQ86SZ2 158 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 ABHD12Q8N2K0 398 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 SNX22Q96L94 193 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 PKIBQ9C010 78 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 REEP1Q9H902 201 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 PAPOLBQ9NRJ5 636 aaKnown RBP11.06□□□□□ -0.64
CCDC58-207ENST00000498466 GTF2A1LQ9UNN4 478 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 LSM4Q9Y4Z0 139 aaKnown RBP11.06□□□□□ -0.64
CCDC58-207ENST00000498466 DNAH7Q8WXX0 4024 aa11.06□□□□□ -0.64
CCDC58-207ENST00000498466 TMEM82A0PJX8 343 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 A6NIN4 97 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 LEUTXA8MZ59 168 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 M0QZK8 103 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 MMP23AO75900 390 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 INMTO95050 263 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 GABRR1P24046 479 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 PEX2P28328 305 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 PRDX6P30041 224 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 MAGEA2P43356 314 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 RAB25P57735 213 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 GRK1Q15835 563 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 ZNF829Q3KNS6 432 aaPredicted RBP11.05□□□□□ -0.64
CCDC58-207ENST00000498466 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 TMEM42Q69YG0 159 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 CYP2R1Q6VVX0 501 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 KLHL30-AS1Q8NEE0 82 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 OR10G2Q8NGC3 310 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 TRMT10AQ8TBZ6 339 aaKnown RBP11.05□□□□□ -0.64
CCDC58-207ENST00000498466 ZNF596Q8TC21 504 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 CEP19Q96LK0 163 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 PRR25Q96S07 402 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 CDRT15Q96T59 188 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 CHST6Q9GZX3 395 aa11.05□□□□□ -0.64
CCDC58-207ENST00000498466 NUFIP1Q9UHK0 495 aaKnown RBP11.05□□□□□ -0.64
CCDC58-207ENST00000498466 HUWE1Q7Z6Z7 4374 aaKnown RBP11.05□□□□□ -0.64
CCDC58-207ENST00000498466 FAM230AA0A1W2PPH8 454 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 FAM172BPA6NC97 362 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 F8VVB4 439 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 F8VWA3 439 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 TTRP02766 147 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 SLC6A1P30531 599 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 OR3A4PP47883 348 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 RIDAP52758 137 aaKnown RBP11.04□□□□□ -0.64
CCDC58-207ENST00000498466 BDH1Q02338 343 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 MFGE8Q08431 387 aaPredicted RBP11.04□□□□□ -0.64
CCDC58-207ENST00000498466 SLC35D3Q5M8T2 416 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 PRAMEF5Q5TYX0 476 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 BAIAP2L2Q6UXY1 529 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 CD300LDQ6UXZ3 194 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 RTN4RL2Q86UN3 420 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 CPOQ8IVL8 374 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 ZNF679Q8IYX0 411 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 PGAM4Q8N0Y7 254 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 BBS1Q8NFJ9 593 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 SLAMF9Q96A28 289 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 P2RX4Q99571 388 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 TTTY10Q9BZA0 68 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 YIPF3Q9GZM5 350 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 MYLK2Q9H1R3 596 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 CCDC134Q9H6E4 229 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 ZFP57Q9NU63 452 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 MTCH1Q9NZJ7 389 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 DNAJB9Q9UBS3 223 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 IKZF2Q9UKS7 526 aa11.04□□□□□ -0.64
CCDC58-207ENST00000498466 TENM2Q9NT68 2774 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 ZNF254O75437 659 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 SASH3O75995 380 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 HAND1O96004 215 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 IGHA1P01876 353 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 MRPL3P09001 348 aaKnown RBP11.03□□□□□ -0.64
CCDC58-207ENST00000498466 CEACAM3P40198 252 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 LUMP51884 338 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-207ENST00000498466 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms