RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 NPAP1Q9NZP6 1156 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 IL19Q9UHD0 177 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 IGF2RP11717 2491 aa7.21□□□□□ -1.26
SF3A1-210ENST00000498259 DPRXA6NFQ7 191 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 LRRC30A6NM36 301 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 MFNGO00587 321 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 CDIPTO14735 213 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 DEGS1O15121 323 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 LANCL1O43813 399 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 GOSR1O95249 250 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 TCRBP04435 133 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 PRKACAP17612 351 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 BCL3P20749 454 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 GIFP27352 417 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 APOBEC3AP31941 199 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 CCKARP32238 428 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 SERPINF1P36955 418 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 CFHR2P36980 270 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 RFX2P48378 723 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 KCNJ3P48549 501 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 PRSS12P56730 875 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 RAB25P57735 213 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ERVS71-1P61550 626 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 PLA2G7Q13093 441 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF154Q13106 437 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 IKZF1Q13422 519 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 SRSF7Q16629 238 aaKnown RBP eCLIP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 SMIM21Q3B7S5 101 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 MOGAT2Q3SYC2 334 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 CHRFAM7AQ494W8 412 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 RNASE12Q5GAN4 147 aaKnown RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NCMAPQ5T1S8 102 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ATAD3CQ5T2N8 411 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 C11orf88Q6PI97 169 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 BTN2A1Q7KYR7 527 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ARRDC1Q8N5I2 433 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 POC1AQ8NBT0 407 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 SCCPDHQ8NBX0 429 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 OR4K15Q8NH41 348 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NEK7Q8TDX7 302 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 CCDC107Q8WV48 283 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ST8SIA4Q92187 359 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ELMOD3Q96FG2 381 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NKX3-1Q99801 234 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 CMSS1Q9BQ75 279 aaKnown RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NICN1Q9BSH3 213 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 TLNRD1Q9H1K6 362 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 KCNK15Q9H427 330 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 ZMAT3Q9HA38 289 aaKnown RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 GPN1Q9HCN4 374 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 C12orf4Q9NQ89 552 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 TREM2Q9NZC2 230 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 MTCH1Q9NZJ7 389 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 TAAR3PQ9P1P4 343 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NLKQ9UBE8 527 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 RNF115Q9Y4L5 304 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NPTNQ9Y639 398 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 PIEZO2Q9H5I5 2752 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 BOD1L1Q8NFC6 3051 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 MAP1BP46821 2468 aaKnown RBP7.2□□□□□ -1.26
SF3A1-210ENST00000498259 NCOR2Q9Y618 2525 aa7.2□□□□□ -1.26
SF3A1-210ENST00000498259 IGKV1-12A0A0C4DH73 117 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 KIR2DS1A0A191URI9 304 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 hCG_1807616A0A1W2PRN6 198 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 MEIOCA2RUB1 952 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 B8ZZF3 427 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 B9A039 149 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 M0R233 179 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 GEMIN2O14893 280 aaKnown RBP7.19□□□□□ -1.26
SF3A1-210ENST00000498259 PTBP3O95758 552 aaKnown RBP7.19□□□□□ -1.26
SF3A1-210ENST00000498259 IGKV1D-12P01611 117 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 CD74P04233 296 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 AMY2AP04746 511 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 FCER2P06734 321 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 THBDP07204 575 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 SFTPBP07988 381 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ADH4P08319 380 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 CTXN2P0C2S0 81 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 OR4A8P0C604 315 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 PGA5P0DJD9 388 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 NAT1P18440 290 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 AMY2BP19961 511 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 CHATP28329 748 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 KIR2DL3P43628 341 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 KIR2DS4P43632 304 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 GATA4P43694 442 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 BCAP31P51572 246 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 TMEM50BP56557 158 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ARPC4P59998 168 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 TSPAN5P62079 268 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ADORA2A-AS1P86434 159 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 TLE1Q04724 770 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 KIR2DS1Q14954 304 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 TESK1Q15569 626 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 GRK1Q15835 563 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 DMRTC1Q5HYR2 192 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 PLAC9Q5JTB6 97 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 CRIP3Q6Q6R5 217 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms