RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZNF780BQ9Y6R6 833 aa1.01□□□□□ -2.25
SMC4-227ENST00000497984 SBNO1A3KN83 1393 aa1□□□□□ -2.25
SMC4-227ENST00000497984 HELZ2Q9BYK8 2649 aaKnown RBP1□□□□□ -2.25
SMC4-227ENST00000497984 VWA8A3KMH1 1905 aa1□□□□□ -2.25
SMC4-227ENST00000497984 IGHV3-43A0A0B4J1X8 118 aa1□□□□□ -2.25
SMC4-227ENST00000497984 TRGV4A0A0C4DH28 118 aa1□□□□□ -2.25
SMC4-227ENST00000497984 K7ERS5 55 aa1□□□□□ -2.25
SMC4-227ENST00000497984 ZNF701M0R085 212 aaPredicted RBP1□□□□□ -2.25
SMC4-227ENST00000497984 S1PR2O95136 353 aa1□□□□□ -2.25
SMC4-227ENST00000497984 TRGV3P03979 118 aa1□□□□□ -2.25
SMC4-227ENST00000497984 HCCSP53701 268 aa1□□□□□ -2.25
SMC4-227ENST00000497984 SLC18A1P54219 525 aa1□□□□□ -2.25
SMC4-227ENST00000497984 LAMTOR4Q0VGL1 99 aa1□□□□□ -2.25
SMC4-227ENST00000497984 PMVKQ15126 192 aa1□□□□□ -2.25
SMC4-227ENST00000497984 ELOCQ15369 112 aa1□□□□□ -2.25
SMC4-227ENST00000497984 HIKESHIQ53FT3 197 aa1□□□□□ -2.25
SMC4-227ENST00000497984 PIP5KL1Q5T9C9 394 aa1□□□□□ -2.25
SMC4-227ENST00000497984 MLIPQ5VWP3 458 aa1□□□□□ -2.25
SMC4-227ENST00000497984 TTC19Q6DKK2 380 aaPredicted RBP1□□□□□ -2.25
SMC4-227ENST00000497984 ULK3Q6PHR2 472 aa1□□□□□ -2.25
SMC4-227ENST00000497984 ANGPTL8Q6UXH0 198 aa1□□□□□ -2.25
SMC4-227ENST00000497984 ZNF738Q8NE65 137 aa1□□□□□ -2.25
SMC4-227ENST00000497984 PROKR2Q8NFJ6 384 aa1□□□□□ -2.25
SMC4-227ENST00000497984 OR8K1Q8NGG5 319 aa1□□□□□ -2.25
SMC4-227ENST00000497984 OR8S1Q8NH09 359 aa1□□□□□ -2.25
SMC4-227ENST00000497984 ZFAND1Q8TCF1 268 aa1□□□□□ -2.25
SMC4-227ENST00000497984 CERS2Q96G23 380 aa1□□□□□ -2.25
SMC4-227ENST00000497984 PYURFQ96I23 114 aa1□□□□□ -2.25
SMC4-227ENST00000497984 C20orf144Q9BQM9 153 aa1□□□□□ -2.25
SMC4-227ENST00000497984 MRPL20Q9BYC9 149 aaKnown RBP1□□□□□ -2.25
SMC4-227ENST00000497984 CHRNA10Q9GZZ6 450 aa1□□□□□ -2.25
SMC4-227ENST00000497984 TXNIPQ9H3M7 391 aa1□□□□□ -2.25
SMC4-227ENST00000497984 CLSTN2Q9H4D0 955 aa1□□□□□ -2.25
SMC4-227ENST00000497984 RHOFQ9HBH0 211 aa1□□□□□ -2.25
SMC4-227ENST00000497984 KLF13Q9Y2Y9 288 aaPredicted RBP1□□□□□ -2.25
SMC4-227ENST00000497984 ICE1Q9Y2F5 2266 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 WDR19Q8NEZ3 1342 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 ISLRO14498 428 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 RGS5O15539 181 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 SLC37A4O43826 429 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 DHRS3O75911 302 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 OR2A4O95047 310 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 MLNP12872 115 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 MLF1P58340 268 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 RPL10AP62906 217 aaKnown RBP0.99□□□□□ -2.25
SMC4-227ENST00000497984 CDNFQ49AH0 187 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 TTC32Q5I0X7 151 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 OR2W3Q7Z3T1 314 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 BBOF1Q8ND07 529 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 OR4K2Q8NGD2 314 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 TCP10LQ8TDR4 215 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 TFGQ92734 400 aaPredicted RBP0.99□□□□□ -2.25
SMC4-227ENST00000497984 OR2A7Q96R45 310 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 IQCGQ9H095 443 aaKnown RBP0.99□□□□□ -2.25
SMC4-227ENST00000497984 PORCNQ9H237 461 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 ARMC7Q9H6L4 198 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 PRO0628Q9UI54 55 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 ORC6Q9Y5N6 252 aa0.99□□□□□ -2.25
SMC4-227ENST00000497984 TTC41PQ6P2S7 1318 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 A0A0B4J2C4 111 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 A0A1B0GTQ1 180 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 TRAPPC6AO75865 159 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 HLA-AP01891 365 aaKnown RBP0.98□□□□□ -2.25
SMC4-227ENST00000497984 OPN1SWP03999 348 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 RHOCP08134 193 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 STAG3L3P0CL85 134 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 GZMHP20718 246 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 CSKP41240 450 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 PSMD4P55036 377 aaKnown RBP0.98□□□□□ -2.25
SMC4-227ENST00000497984 DAOAP59103 153 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 ST3GAL4Q11206 333 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 CLLU1OSQ5K130 101 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 CLEC19AQ6UXS0 136 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 TMCO2Q7Z6W1 182 aaPredicted RBP0.98□□□□□ -2.25
SMC4-227ENST00000497984 SETD3Q86TU7 594 aaPredicted RBP0.98□□□□□ -2.25
SMC4-227ENST00000497984 ZFP82Q8N141 532 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 CYP4Z2PQ8N1L4 340 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 OR52K2Q8NGK3 314 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 OR2K2Q8NGT1 345 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 AGR3Q8TD06 166 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 PEX13Q92968 403 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 ASB7Q9H672 318 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 TUBA4BQ9H853 241 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 RBM22Q9NW64 420 aaKnown RBP eCLIP0.98□□□□□ -2.255e-24■■■■■ 66.5
SMC4-227ENST00000497984 DDIT4Q9NX09 232 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 TFR2Q9UP52 801 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 DYSFO75923 2080 aa0.98□□□□□ -2.25
SMC4-227ENST00000497984 FAM240AA0A1B0GVK7 77 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 NCF1BA6NI72 391 aaPredicted RBP0.97□□□□□ -2.25
SMC4-227ENST00000497984 NCF1CA8MVU1 366 aaPredicted RBP0.97□□□□□ -2.25
SMC4-227ENST00000497984 F5H5P2 479 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 IGKV1D-33P01593 117 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 IGKV1-33P01594 117 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 P0DMU3 169 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 FAM231AP0DMU4 169 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 FAM231CP0DMU5 169 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 GZMAP12544 262 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 CD9P21926 228 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 IVDP26440 423 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 ZNF83P51522 516 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms