RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FXYD5Q96DB9 178 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 CENPNQ96H22 339 aaPredicted RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 YPEL4Q96NS1 127 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 PKMYT1Q99640 499 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 ANAPC13Q9BS18 74 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 OR2AG1Q9H205 316 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 RDH14Q9HBH5 336 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 VCX3AQ9NNX9 186 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 TUBG2Q9NRH3 451 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 PEF1Q9UBV8 284 aaKnown RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 ZBED9Q6R2W3 1325 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 AQRO60306 1485 aaKnown RBP eCLIP1.54□□□□□ -2.162e-6■■□□□ 13.8
PSPC1-205ENST00000497722 LOXHD1Q8IVV2 1947 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 TRAV8-7A0A075B6U6 113 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 H0YC42 278 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 COX7A2P2O60397 106 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 FSTL3O95633 263 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 RLN2P04090 185 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 IVDP26440 423 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 CRABP2P29373 138 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 IL12BP29460 328 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 MLF1P58340 268 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 SLC9A3R2Q15599 337 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 SSX1Q16384 188 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 NDUFAF6Q330K2 333 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 SSH2Q76I76 1423 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 LINC00596Q86U02 117 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 NLRC5Q86WI3 1866 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 KRTAP13-1Q8IUC0 172 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 AMN1Q8IY45 258 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 EIF4E3Q8N5X7 224 aaKnown RBP1.53□□□□□ -2.16
PSPC1-205ENST00000497722 ZFP62Q8NB50 900 aaPredicted RBP1.53□□□□□ -2.16
PSPC1-205ENST00000497722 OR4K2Q8NGD2 314 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 OR8A1Q8NGG7 326 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 OR51L1Q8NGJ5 315 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 OR6K3Q8NGY3 331 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 TWIST2Q8WVJ9 160 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 QKIQ96PU8 341 aaKnown RBP eCLIP1.53□□□□□ -2.16
PSPC1-205ENST00000497722 PORCNQ9H237 461 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 RHOFQ9HBH0 211 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 FAM60AQ9NP50 221 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 TMEM38BQ9NVV0 291 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 NAGKQ9UJ70 344 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 AP3M1Q9Y2T2 418 aa1.53□□□□□ -2.16
PSPC1-205ENST00000497722 KIAA1671Q9BY89 1806 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 DHX57Q6P158 1386 aaKnown RBP1.52□□□□□ -2.17
PSPC1-205ENST00000497722 A0A0B4J2C4 111 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 A0A1W2PPV4 95 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 GMNCA6NCL1 334 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.52□□□□□ -2.17
PSPC1-205ENST00000497722 H3BQ85 93 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 UPK2O00526 184 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 SLC37A4O43826 429 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 STAG3L2P0CL84 134 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 SFTPCP11686 197 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 PTHLHP12272 177 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 IMPA1P29218 277 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 SPAG1Q07617 926 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 BNIP2Q12982 314 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 ENDOGQ14249 297 aaKnown RBP1.52□□□□□ -2.17
PSPC1-205ENST00000497722 TMEM241Q24JQ0 296 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 SMARCD3Q6STE5 483 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 CYP4Z1Q86W10 505 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 NELFCDQ8IXH7 590 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 ZNF321PQ8N8H1 164 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 OR8S1Q8NH09 359 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 UBA3Q8TBC4 463 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 DOK4Q8TEW6 326 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 ZNF75AQ96N20 296 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 RILPQ96NA2 401 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 APOL4Q9BPW4 351 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 C20orf144Q9BQM9 153 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 UTP23Q9BRU9 249 aaKnown RBP1.52□□□□□ -2.17
PSPC1-205ENST00000497722 HIGD2AQ9BW72 106 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 ULBP1Q9BZM6 244 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 TSGA10Q9BZW7 698 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 GABARAPL1Q9H0R8 117 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 DNAJC27Q9NZQ0 273 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 ANXA10Q9UJ72 324 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 V9GYY9 64 aa1.52□□□□□ -2.17
PSPC1-205ENST00000497722 COL5A1P20908 1838 aaPredicted RBP1.52□□□□□ -2.17
PSPC1-205ENST00000497722 SETD1AO15047 1707 aaKnown RBP1.52□□□□□ -2.17
PSPC1-205ENST00000497722 FBN1P35555 2871 aaKnown RBP1.51□□□□□ -2.17
PSPC1-205ENST00000497722 LOC389332A0A1B0GUA5 103 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 GOLGA6L7A0A1B0GV03 622 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 MYBPHLA2RUH7 354 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 M0R1B8 84 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 PSCAO43653 123 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 GATCO43716 136 aaKnown RBP1.51□□□□□ -2.17
PSPC1-205ENST00000497722 ALOX12BO75342 701 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 IGHV3-53P01767 116 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 TRGV3P03979 118 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 CBR1P16152 277 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 ZNF708P17019 499 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 LGALS3P17931 250 aaKnown RBP1.51□□□□□ -2.17
PSPC1-205ENST00000497722 SRMP19623 302 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 TAC1P20366 129 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 TEAD1P28347 426 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 S100A2P29034 98 aa1.51□□□□□ -2.17
PSPC1-205ENST00000497722 GPR4P46093 362 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms