RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 IGKV1-17P01599 117 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 CD8AP01732 235 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 GIMD1P0DJR0 217 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 CCL2P13500 99 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 HLA-DMAP28067 261 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 TGM4P49221 684 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 TSPAN5P62079 268 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 FLI1Q01543 452 aaPredicted RBP2.19□□□□□ -2.06
SMC4-225ENST00000497203 C2orf80Q0P641 193 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 LINC00303Q3SY05 128 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 CLEC12AQ5QGZ9 265 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 ZNF678Q5SXM1 525 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 MRPL2Q5T653 305 aaKnown RBP2.19□□□□□ -2.06
SMC4-225ENST00000497203 KPRPQ5T749 579 aaPredicted RBP2.19□□□□□ -2.06
SMC4-225ENST00000497203 ZFAND6Q6FIF0 208 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 ZDHHC22Q8N966 263 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 OR5H2Q8NGV7 314 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 UBA3Q8TBC4 463 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 QKIQ96PU8 341 aaKnown RBP eCLIP2.19□□□□□ -2.06
SMC4-225ENST00000497203 DERL3Q96Q80 235 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 OR2A7Q96R45 310 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 GOLPH3Q9H4A6 298 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 RDH14Q9HBH5 336 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 PARP11Q9NR21 331 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 INIPQ9NRY2 104 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 RMND1Q9NWS8 449 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 COL1A2P08123 1366 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 ADGRL1O94910 1474 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 OR2AT4A6NND4 320 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 C16orf90A8MZG2 172 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 RLN2P04090 185 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 CDK1P06493 297 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 TAC1P20366 129 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 XKP51811 444 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 MEF2CQ06413 473 aaPredicted RBP2.18□□□□□ -2.06
SMC4-225ENST00000497203 ELOCQ15369 112 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 GUSBP1Q15486 140 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 TNXAQ16473 311 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 PSG3Q16557 428 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 CLLU1OSQ5K130 101 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 DAZ4Q86SG3 579 aaKnown RBP2.18□□□□□ -2.06
SMC4-225ENST00000497203 SGPP2Q8IWX5 399 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 OR8A1Q8NGG7 326 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 TMEM239Q8WW34 195 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 C22orf15Q8WYQ4 148 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 CCDC124Q96CT7 223 aaKnown RBP2.18□□□□□ -2.06
SMC4-225ENST00000497203 CFAP53Q96M91 514 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 PRRG3Q9BZD7 231 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 SND1-IT1Q9HBX3 110 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 DAZ1Q9NQZ3 744 aaKnown RBP2.18□□□□□ -2.06
SMC4-225ENST00000497203 DIABLOQ9NR28 239 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 ZNF780BQ9Y6R6 833 aa2.18□□□□□ -2.06
SMC4-225ENST00000497203 MIA3Q5JRA6 1907 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 LOC389332A0A1B0GUA5 103 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 GMNCA6NCL1 334 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 CD300LBA8K4G0 201 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 CLDN34H7C241 214 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 RGS5O15539 181 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 ENSAO43768 121 aaKnown RBP2.17□□□□□ -2.06
SMC4-225ENST00000497203 CNMDO75829 334 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 DHRS3O75911 302 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 CXorf1O96002 111 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 NRASP01111 189 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 HRASP01112 189 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 KRASP01116 189 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 TUFMP49411 452 aaKnown RBP2.17□□□□□ -2.06
SMC4-225ENST00000497203 RAB38P57729 211 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 RBX1P62877 108 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 ZNF404Q494X3 552 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 TBPL2Q6SJ96 375 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 GAPTQ8N292 157 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 LINC00337Q8N6G1 96 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 DRAXINQ8NBI3 349 aaPredicted RBP2.17□□□□□ -2.06
SMC4-225ENST00000497203 ZNF555Q8NEP9 628 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 ZNF721Q8TF20 911 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 NELFBQ8WX92 580 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 PEBP4Q96S96 227 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 THTPAQ9BU02 230 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 NXF2Q9GZY0 626 aaKnown RBP2.17□□□□□ -2.06
SMC4-225ENST00000497203 CHMP5Q9NZZ3 219 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 TAC3Q9UHF0 121 aa2.17□□□□□ -2.06
SMC4-225ENST00000497203 KLF13Q9Y2Y9 288 aaPredicted RBP2.17□□□□□ -2.06
SMC4-225ENST00000497203 SETD1AO15047 1707 aaKnown RBP2.17□□□□□ -2.06
SMC4-225ENST00000497203 A0A1B0GW15 77 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 IZUMO1RA6ND01 250 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 hCG_2039718K7EN88 272 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 YKT6O15498 198 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 KCNK2O95069 426 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 CST4P01036 141 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 CD5P06127 495 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 OR5AC1P0C628 307 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 SEC11BP0C7V7 166 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 TEAD1P28347 426 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 SLC6A1P30531 599 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 KCNJ3P48549 501 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 TTPAP49638 278 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 HADHBP55084 474 aaKnown RBP2.16□□□□□ -2.06
SMC4-225ENST00000497203 CCL23P55773 120 aa2.16□□□□□ -2.06
SMC4-225ENST00000497203 KRTAP10-10P60014 251 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms