RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 MAGEB3O15480 346 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 NOS1APO75052 506 aaPredicted RBP8.14□□□□□ -1.11
CALD1-223ENST00000496024 IFNA2P01563 188 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 TMEM225BP0DP42 221 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 PRKACAP17612 351 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 BCL3P20749 454 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 DUSP1P28562 367 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 FGF12P61328 243 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 ERVK11-1P61568 191 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 SRSF2Q01130 221 aaKnown RBP8.14□□□□□ -1.11
CALD1-223ENST00000496024 PAX8Q06710 450 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 PDZK1IP1Q13113 114 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 SPHARQ15513 63 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 KISS1Q15726 138 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 DGUOKQ16854 277 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 ARMCX4Q5H9R4 360 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 RBM48Q5RL73 367 aaKnown RBP8.14□□□□□ -1.11
CALD1-223ENST00000496024 ATPAF1Q5TC12 328 aaPredicted RBP8.14□□□□□ -1.11
CALD1-223ENST00000496024 RNLSQ5VYX0 342 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 ASPHD2Q6ICH7 369 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 MKXQ8IYA7 352 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 CD177Q8N6Q3 437 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 NANPQ8TBE9 248 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 C22orf15Q8WYQ4 148 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 PGLYRP3Q96LB9 341 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 PCGF1Q9BSM1 259 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 TMED9Q9BVK6 235 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 DNTTIP1Q9H147 329 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 DUSP21Q9H596 190 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 OCEL1Q9H607 264 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 IL36RNQ9UBH0 155 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 SLC25A10Q9UBX3 287 aaPredicted RBP8.14□□□□□ -1.11
CALD1-223ENST00000496024 LSM2Q9Y333 95 aaKnown RBP8.14□□□□□ -1.11
CALD1-223ENST00000496024 MAB21L2Q9Y586 359 aa8.14□□□□□ -1.11
CALD1-223ENST00000496024 IGKV1-12A0A0C4DH73 117 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 TRBV5-5A0A0J9YX44 114 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 ECDO95905 644 aaPredicted RBP8.13□□□□□ -1.11
CALD1-223ENST00000496024 IGKV1D-12P01611 117 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 SFTPBP07988 381 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 RPS11P62280 158 aaKnown RBP eCLIP8.13□□□□□ -1.11
CALD1-223ENST00000496024 ARF6P62330 175 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 PPP3R1P63098 170 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 SCN1BQ07699 218 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 INSL4Q14641 139 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 IRF3Q14653 427 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 Q499Y3 187 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 YIF1BQ5BJH7 314 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 PRSS48Q7RTY5 328 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 C1QL2Q7Z5L3 287 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 FAM58AQ8N1B3 248 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 ASCC1Q8N9N2 400 aaKnown RBP8.13□□□□□ -1.11
CALD1-223ENST00000496024 PNLDC1Q8NA58 520 aaKnown RBP8.13□□□□□ -1.11
CALD1-223ENST00000496024 OR52N4Q8NGI2 321 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 DACT3Q96B18 629 aaPredicted RBP8.13□□□□□ -1.11
CALD1-223ENST00000496024 SDSLQ96GA7 329 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 FAM192AQ9GZU8 254 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 HES4Q9HCC6 221 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 ONECUT1Q9UBC0 465 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 CKLFQ9UBR5 152 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 RPUSD1Q9UJJ7 312 aaKnown RBP8.13□□□□□ -1.11
CALD1-223ENST00000496024 ZNF222Q9UK12 451 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 BLOC1S6Q9UL45 172 aa8.13□□□□□ -1.11
CALD1-223ENST00000496024 KIAA2026Q5HYC2 2103 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 TRAV8-7A0A075B6U6 113 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 A0A1W2PQ09 198 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 MEX3AA1L020 520 aaKnown RBP8.12□□□□□ -1.11
CALD1-223ENST00000496024 ZNF879B4DU55 563 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
CALD1-223ENST00000496024 RRP9O43818 475 aaKnown RBP8.12□□□□□ -1.11
CALD1-223ENST00000496024 TOX4O94842 621 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 ALX3O95076 343 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 KNG1P01042 644 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 PPIAL4GP0DN37 164 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 EPHA1P21709 976 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 BDKRB2P30411 391 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 TGFBR2P37173 567 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 BDH1Q02338 343 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 COL10A1Q03692 680 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 PRB3Q04118 309 aaPredicted RBP8.12□□□□□ -1.11
CALD1-223ENST00000496024 KLF17Q5JT82 389 aaPredicted RBP8.12□□□□□ -1.11
CALD1-223ENST00000496024 DDI2Q5TDH0 399 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 LIPKQ5VXJ0 399 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 ZNF529Q6P280 563 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 CRIP3Q6Q6R5 217 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 Q8IYB0 196 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 FAM185AQ8N0U4 392 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 TEX29Q8N6K0 151 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 OR4M1Q8NGD0 313 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 OR10K1Q8NGX5 313 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 TNFAIP8L1Q8WVP5 186 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 UFD1Q92890 307 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 TMEM203Q969S6 136 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 NR1H4Q96RI1 486 aaPredicted RBP8.12□□□□□ -1.11
CALD1-223ENST00000496024 DCTN5Q9BTE1 182 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 CNTD2Q9H8S5 307 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 NOX4Q9NPH5 578 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 TMEM138Q9NPI0 162 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 ING4Q9UNL4 249 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 GSTK1Q9Y2Q3 226 aa8.12□□□□□ -1.11
CALD1-223ENST00000496024 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms