RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 GALK2Q01415 458 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 DEFA6Q01524 100 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 IRF3Q14653 427 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 HIST3H3Q16695 136 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 NXNL2Q5VZ03 156 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 ZNF584Q8IVC4 421 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 GID4Q8IVV7 300 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 LRRC18Q8N456 261 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 TEX29Q8N6K0 151 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 NOXO1Q8NFA2 376 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 OR6K6Q8NGW6 343 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 THAP6Q8TBB0 222 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 NANPQ8TBE9 248 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 FNDC8Q8TC99 324 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 PGAM5Q96HS1 289 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 ZNF416Q9BWM5 594 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 ULBP2Q9BZM5 246 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 TAAR3PQ9P1P4 343 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 OPN4Q9UHM6 478 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 RPL36Q9Y3U8 105 aaKnown RBP5.34□□□□□ -1.55
VIM-207ENST00000495528 PPIAL4AQ9Y536 164 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 CACNG2Q9Y698 323 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 MEGF8Q7Z7M0 2845 aa5.34□□□□□ -1.55
VIM-207ENST00000495528 IGLV1-36A0A0B4J1U3 117 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 A0A0G2JMP0 313 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 A0A0X1KG70 313 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 CCDC182A6NF36 153 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 SNTNA6NMZ2 147 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 J3QLI3 93 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 SELENOFO60613 162 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 RAB36O95755 333 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 IGHV2-5P01817 119 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 SERPINA5P05154 406 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 RPSAP08865 295 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 DBTP11182 482 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 CCL2P13500 99 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 EEF1B2P24534 225 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 LAP3P28838 519 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 HTR1FP30939 366 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 CRYBB2P43320 205 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 ERVS71-1P61550 626 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 RPS23P62266 143 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 HSF2Q03933 536 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 ST3GAL4Q11206 333 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 MEP1BQ16820 701 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 PCGF3Q3KNV8 242 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 SLC35D3Q5M8T2 416 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 RBM48Q5RL73 367 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 LINC01590Q5TEZ4 76 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 DNM1P34Q6PK57 102 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 C9orf139Q6ZV77 190 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 LHFPL3Q86UP9 236 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 ERI1Q8IV48 349 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 SKA3Q8IX90 412 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 STX19Q8N4C7 294 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 BPIFB2Q8N4F0 458 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 OR4M2Q8NGB6 313 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 OR51G2Q8NGK0 314 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 OR52I1Q8NGK6 324 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 OR13A1Q8NGR1 328 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 THEM6Q8WUY1 208 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 C11orf40Q8WZ69 217 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 GTF3AQ92664 365 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 TAF15Q92804 592 aaKnown RBP eCLIP5.33□□□□□ -1.56
VIM-207ENST00000495528 SAT2Q96F10 170 aaPredicted RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 TBX5Q99593 518 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 SH3GL3Q99963 347 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 YTHDF1Q9BYJ9 559 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 CCDC90BQ9GZT6 254 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 OR51B6Q9H340 312 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 WDR76Q9H967 626 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 PLCXD1Q9NUJ7 323 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 DDX28Q9NUL7 540 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 ERVK-18Q9QC07 812 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 WARS2Q9UGM6 360 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 PSORS1C1Q9UIG5 152 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.33□□□□□ -1.56
VIM-207ENST00000495528 EXOGQ9Y2C4 368 aaKnown RBP5.33□□□□□ -1.56
VIM-207ENST00000495528 TPRKBQ9Y3C4 175 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 WIPI2Q9Y4P8 454 aa5.33□□□□□ -1.56
VIM-207ENST00000495528 IGLV3-9A0A075B6K5 115 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 EFCAB10A6NFE3 127 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 TMEM178BH3BS89 294 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SLC1A7O00341 560 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 MAGEB4O15481 346 aaPredicted RBP5.32□□□□□ -1.56
VIM-207ENST00000495528 UBL3O95164 117 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 SBK2P0C263 348 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 OR8G3PP0DMU2 310 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 NR2C1P13056 603 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 ZNF250P15622 560 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 CRHBPP24387 322 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 GCH1P30793 250 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 NAA10P41227 235 aaPredicted RBP5.32□□□□□ -1.56
VIM-207ENST00000495528 RPS27P42677 84 aaKnown RBP5.32□□□□□ -1.56
VIM-207ENST00000495528 RAD52P43351 418 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 ZNF133P52736 654 aaPredicted RBP5.32□□□□□ -1.56
VIM-207ENST00000495528 BLVRAP53004 296 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 CXCR4P61073 352 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 GLO1Q04760 184 aa5.32□□□□□ -1.56
VIM-207ENST00000495528 TMED1Q13445 227 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms