RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CKLFQ9UBR5 152 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 ZNF222Q9UK12 451 aa16.15■□□□□ 0.18
HDAC4-212ENST00000495497 SF3B6Q9Y3B4 125 aaKnown RBP16.15■□□□□ 0.18
HDAC4-212ENST00000495497 CYB5AP00167 134 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 ALDOBP05062 364 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 TMEM225BP0DP42 221 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 CPT2P23786 658 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 SNU13P55769 128 aaKnown RBP16.14■□□□□ 0.17
HDAC4-212ENST00000495497 DGUOKQ16854 277 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 UBE2UQ5VVX9 321 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 TMEM91Q6ZNR0 172 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 SLC36A1Q7Z2H8 476 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 C1QL2Q7Z5L3 287 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 ST8SIA4Q92187 359 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 EMG1Q92979 244 aaKnown RBP16.14■□□□□ 0.17
HDAC4-212ENST00000495497 OR5V1Q9UGF6 321 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 FOXJ3Q9UPW0 622 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 POLR3KQ9Y2Y1 108 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-212ENST00000495497 MAB21L2Q9Y586 359 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 MTORP42345 2549 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 ARHGAP32A7KAX9 2087 aa16.14■□□□□ 0.17
HDAC4-212ENST00000495497 NKX6-3A6NJ46 265 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 C22orf46C9J442 243 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 SC5DO75845 299 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 SFTPBP07988 381 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 MAPK3P27361 379 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-212ENST00000495497 PSMB9P28065 219 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 PRDX2P32119 198 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 ZNF93P35789 620 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-212ENST00000495497 OR3A4PP47883 348 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 PAX2Q02962 417 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 FAM120AOSQ5T036 256 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 DCAF12L2Q5VW00 463 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 ZNRF1Q8ND25 227 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 TNFAIP8L1Q8WVP5 186 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 FAM192AQ9GZU8 254 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 DNTTIP1Q9H147 329 aa16.13■□□□□ 0.17
HDAC4-212ENST00000495497 LOC105371242A0A075B767 164 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 SIGLEC5O15389 551 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 NDUFB3O43676 98 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 KDM4BO94953 1096 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 AVPP01185 164 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 PRKACAP17612 351 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 DUSP1P28562 367 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 NPY4RP50391 375 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 IL13RA1P78552 427 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 FABP5Q01469 135 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 FAM58AQ8N1B3 248 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 TMPRSS13Q9BYE2 586 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 TMEM160Q9NX00 188 aa16.12■□□□□ 0.17
HDAC4-212ENST00000495497 HIVEP2P31629 2446 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.11■□□□□ 0.178e-7■■■■■ 27.5
HDAC4-212ENST00000495497 ZFHX3Q15911 3703 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 A0A0G2JMP0 313 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 A0A0X1KG70 313 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 RGS9O75916 674 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-212ENST00000495497 KNG1P01042 644 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 GABRA5P31644 462 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 NEDD8Q15843 81 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 BTN2A1Q7KYR7 527 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 Q8IYB0 196 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 SAXO1Q8IYX7 474 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 ZSCAN4Q8NAM6 433 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-212ENST00000495497 TMEM185AQ8NFB2 350 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 OR4M2Q8NGB6 313 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 OR10K1Q8NGX5 313 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 RAB40AQ8WXH6 277 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 THRSPQ92748 146 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 SDSLQ96GA7 329 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 MED30Q96HR3 178 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 NUDT16L1Q9BRJ7 211 aaKnown RBP16.11■□□□□ 0.17
HDAC4-212ENST00000495497 SHARPINQ9H0F6 387 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 ELL3Q9HB65 397 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-212ENST00000495497 HMG20AQ9NP66 347 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 ING4Q9UNL4 249 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 INSIG2Q9Y5U4 225 aa16.11■□□□□ 0.17
HDAC4-212ENST00000495497 FN1P02751 2386 aaKnown RBP16.11■□□□□ 0.17
HDAC4-212ENST00000495497 PPIAL4CA0A0B4J2A2 164 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 IGHV2-70DA0A0C4DH43 119 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 CDRT1O95170 752 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 TNFAIP8O95379 198 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 UCHL1P09936 223 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 ADRA2CP18825 462 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 PTGFRP43088 359 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 COL10A1Q03692 680 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 TRAM1Q15629 374 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 HSD17B12Q53GQ0 312 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 LRRC10Q5BKY1 277 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 C1orf229Q6ZS94 237 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-212ENST00000495497 LRRTM1Q86UE6 522 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 JAGN1Q8N5M9 183 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 FCGR1BQ92637 280 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 DACT3Q96B18 629 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-212ENST00000495497 CPNE2Q96FN4 548 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-212ENST00000495497 C7orf69Q9H7B7 122 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 TCF7L1Q9HCS4 588 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 NDUFB11Q9NX14 153 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 SLC25A10Q9UBX3 287 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-212ENST00000495497 GSTK1Q9Y2Q3 226 aa16.1■□□□□ 0.17
HDAC4-212ENST00000495497 CCRL2O00421 344 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms