RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 MRPL3P09001 348 aaKnown RBP11.38□□□□□ -0.59
VARS-228ENST00000495010 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
VARS-228ENST00000495010 ATP6V1B2P21281 511 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 CD24P25063 80 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 PEX2P28328 305 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 IL24Q13007 206 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 APOFQ13790 326 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 SLX4IPQ5VYV7 408 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 RNF144BQ7Z419 303 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 TRAPPC6BQ86SZ2 158 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 ANGPTL5Q86XS5 388 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 ZNF679Q8IYX0 411 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 BBS1Q8NFJ9 593 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 TRMT10AQ8TBZ6 339 aaKnown RBP11.38□□□□□ -0.59
VARS-228ENST00000495010 ASB17Q8WXJ9 295 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 TTTY10Q9BZA0 68 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 PKIBQ9C010 78 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 TAGLN3Q9UI15 199 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 SLC7A11Q9UPY5 501 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 TMEM14AQ9Y6G1 99 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 LOC110117498-PIK3R3F6TDL0 507 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 ZNF737O75373 536 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 OR2F2O95006 317 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 INMTO95050 263 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 IGLV3-1P01715 115 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 TTRP02766 147 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 CCDC159P0C7I6 412 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 GABRR1P24046 479 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 MPZP25189 248 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 ACTR3P61158 418 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 ERVK11-1P61568 191 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 GK3PQ14409 553 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 GRK1Q15835 563 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 BCL2L15Q5TBC7 163 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 MRPL41Q8IXM3 137 aaKnown RBP11.37□□□□□ -0.59
VARS-228ENST00000495010 TPRX1Q8N7U7 411 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 BCAS4Q8TDM0 211 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 CEP19Q96LK0 163 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
VARS-228ENST00000495010 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 MOB1AQ9H8S9 216 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 ZNF556Q9HAH1 456 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 PAPOLBQ9NRJ5 636 aaKnown RBP11.37□□□□□ -0.59
VARS-228ENST00000495010 DPM3Q9P2X0 92 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 GLS2Q9UI32 602 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 PCDHGB5Q9Y5G0 923 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 U3KQK5 164 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 DNAH3Q8TD57 4116 aa11.37□□□□□ -0.59
VARS-228ENST00000495010 TCRBV5S2A0A599 114 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 A6NIN4 97 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 M0QZK8 103 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 GNGT2O14610 69 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 LMO1P25800 156 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 ROM1Q03395 351 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 MFGE8Q08431 387 aaPredicted RBP11.36□□□□□ -0.59
VARS-228ENST00000495010 TMEM42Q69YG0 159 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 OR52W1Q6IF63 320 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 C10orf99Q6UWK7 81 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 RTN4RL2Q86UN3 420 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 DHFR2Q86XF0 187 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 EGFL6Q8IUX8 553 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 ABHD12Q8N2K0 398 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 OSR2Q8N2R0 312 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 OR4P4Q8NGL7 312 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 ZNF596Q8TC21 504 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 SLAMF9Q96A28 289 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 PLEKHA1Q9HB21 404 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 DNAJB9Q9UBS3 223 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 V9GYS6 101 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 TENM3Q9P273 2699 aa11.36□□□□□ -0.59
VARS-228ENST00000495010 TMEM82A0PJX8 343 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 ARRDC5A6NEK1 342 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 SH2D7A6NKC9 451 aaPredicted RBP11.35□□□□□ -0.59
VARS-228ENST00000495010 NUDT19A8MXV4 375 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 LEUTXA8MZ59 168 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 CST1P01037 141 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 OSMP13725 252 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 SLC2A5P22732 501 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 CEACAM3P40198 252 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 MNAT1P51948 309 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 DGCR2P98153 550 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 SNAPC1Q16533 368 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 KLHL22Q53GT1 634 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 TCF23Q7RTU1 214 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 ENTHD1Q8IYW4 607 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 OR14K1Q8NGZ2 314 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 EMG1Q92979 244 aaKnown RBP11.35□□□□□ -0.59
VARS-228ENST00000495010 CHST6Q9GZX3 395 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 GAL3ST2Q9H3Q3 398 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 MTCH1Q9NZJ7 389 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 OR52A1Q9UKL2 312 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
VARS-228ENST00000495010 DHRS7CA6NNS2 312 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 TOR1AO14656 332 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 HAND1O96004 215 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 MNDAP41218 407 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 THBS3P49746 956 aa11.34□□□□□ -0.59
VARS-228ENST00000495010 CDK5Q00535 292 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms