RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 GABRR1P24046 479 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 NOVA1P51513 510 aaKnown RBP13.38□□□□□ -0.27
SDF4-207ENST00000494748 RND3P61587 244 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 EWSR1Q01844 656 aaKnown RBP eCLIP13.38□□□□□ -0.276e-9■■■■■ 31.6
SDF4-207ENST00000494748 C17orf67Q0P5P2 114 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 KIAA0895LQ68EN5 471 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 ZNF283Q8N7M2 679 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 RTN4IP1Q8WWV3 396 aaPredicted RBP13.38□□□□□ -0.27
SDF4-207ENST00000494748 GTF3AQ92664 365 aaKnown RBP13.38□□□□□ -0.27
SDF4-207ENST00000494748 MVB12AQ96EY5 273 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 S100A13Q99584 98 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 MED12Q93074 2177 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 SUMO3P55854 103 aaPredicted RBP13.37□□□□□ -0.27
SDF4-207ENST00000494748 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 FAAP24Q9BTP7 215 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 ZNF724A8MTY0 619 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 PHOX2AO14813 284 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 DBHP09172 617 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 ICAM4Q14773 271 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 OGFOD3Q6PK18 319 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 C17orf82Q86X59 251 aaPredicted RBP13.37□□□□□ -0.27
SDF4-207ENST00000494748 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 ADPRHL1Q8NDY3 354 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 TMEM171Q8WVE6 324 aa13.37□□□□□ -0.27
SDF4-207ENST00000494748 CDRT15L2A8MXV6 281 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 OPN1LWP04000 364 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 SELLP14151 372 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 CCR5P51681 352 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 PLPPR5Q32ZL2 321 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 RTL6Q6ICC9 239 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 OR11L1Q8NGX0 322 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 PIGTQ969N2 578 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 SLC2A9Q9NRM0 540 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 IGSF23A1L1A6 192 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 DHRS3O75911 302 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 GLI4P10075 376 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 PAX1P15863 534 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 GRB2P62993 217 aaKnown RBP13.36□□□□□ -0.27
SDF4-207ENST00000494748 FBXL14Q8N1E6 418 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 OR6X1Q8NH79 312 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 TOMM40LQ969M1 308 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 PLEKHJ1Q9NW61 149 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 NXT1Q9UKK6 140 aaKnown RBP13.36□□□□□ -0.27
SDF4-207ENST00000494748 VSTM2BA6NLU5 285 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 QDPRP09417 244 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 ZNF728P0DKX0 622 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 ATP6V0CP27449 155 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 DUSP1P28562 367 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 PTGDSP41222 190 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 MRPS21P82921 87 aaKnown RBP13.36□□□□□ -0.27
SDF4-207ENST00000494748 DEFA6Q01524 100 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 DYRK2Q92630 601 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 SUCNR1Q9BXA5 334 aa13.36□□□□□ -0.27
SDF4-207ENST00000494748 A0A0U1RQV5 110 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 ATXN7O15265 892 aaPredicted RBP13.35□□□□□ -0.27
SDF4-207ENST00000494748 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
SDF4-207ENST00000494748 OPRM1P35372 400 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 DLK1P80370 383 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 ARL6IP1Q15041 203 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 C14orf28Q4W4Y0 310 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 KHDC3LQ587J8 217 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 OR10D4PQ8NGN7 298 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 PIGQQ9BRB3 760 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 ASXL3Q9C0F0 2248 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 HEXBP07686 556 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 PHLDA2Q53GA4 152 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 SEC14L6B5MCN3 397 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 TERTO14746 1132 aaKnown RBP13.35□□□□□ -0.27
SDF4-207ENST00000494748 ST8SIA3O43173 380 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 RNF224P0DH78 156 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 ZNF133P52736 654 aaPredicted RBP13.35□□□□□ -0.27
SDF4-207ENST00000494748 SSTP61278 116 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 FBXW12Q6X9E4 464 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 SHISA6Q6ZSJ9 500 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
SDF4-207ENST00000494748 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 ABHD5Q8WTS1 349 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 NECAP2Q9NVZ3 263 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 B3GALT1Q9Y5Z6 326 aa13.35□□□□□ -0.27
SDF4-207ENST00000494748 IGKV1-27A0A075B6S5 117 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 A0A1W2PNR3 127 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 TAGLN2P37802 199 aaKnown RBP13.34□□□□□ -0.27
SDF4-207ENST00000494748 AFF3P51826 1226 aaKnown RBP13.34□□□□□ -0.27
SDF4-207ENST00000494748 CFHR1Q03591 330 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 C1orf189Q5VU69 101 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 SLC35G3Q8N808 338 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
SDF4-207ENST00000494748 SGK3Q96BR1 496 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 PGAM5Q96HS1 289 aa13.34□□□□□ -0.27
SDF4-207ENST00000494748 TP53RKQ96S44 253 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms