RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ELOVL3Q9HB03 270 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 LYRM4Q9HD34 91 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 NPIPB13A6NJU9 1138 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GPR89AB7ZAQ6 455 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 NPIPB4C9JG80 1138 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR2J2O76002 312 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RENP00797 406 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CGAP01215 116 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GPR89BP0CG08 455 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CCL1P22362 96 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GJA4P35212 333 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CLDN2P57739 230 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 TPPP2P59282 170 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RPL23AP62750 156 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 NTHL1P78549 312 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ZP2Q05996 745 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM249Q2WGJ8 235 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ITPRIPL2Q3MIP1 535 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 FNDC7Q5VTL7 733 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 C16orf82Q7Z2V1 217 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ATG4DQ86TL0 474 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 KCNG3Q8TAE7 436 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 MSI2Q96DH6 328 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 WDYHV1Q96HA8 205 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GMPPAQ96IJ6 420 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CAPNS2Q96L46 248 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 MS4A10Q96PG2 267 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 TSPAN32Q96QS1 320 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 AMELYQ99218 206 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RNF2Q99496 336 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR10A5Q9H207 317 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 NAA60Q9H7X0 242 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 PADI3Q9ULW8 664 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 MRPS2Q9Y399 296 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 MRPS23Q9Y3D9 190 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 IGHV2-26A0A0B4J1V2 119 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 A0A1B0GVT2 93 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ADM5C9JUS6 153 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 SCGB1D1O95968 90 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR5G3P0C626 314 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 IGLC2P0DOY2 106 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 IGLC3P0DOY3 106 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CPMP14384 443 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RAB11AP62491 216 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GNB2P62879 340 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RPL19P84098 196 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 FBLN7Q53RD9 439 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OCIAD2Q56VL3 154 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RSPO2Q6UXX9 243 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 Q6ZWC4 215 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 C1orf174Q8IYL3 243 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 STPG4Q8N801 248 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR10S1Q8NGN2 331 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR2A1Q8NGT9 310 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR2AJ1Q8NGZ0 328 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR52N5Q8NH56 324 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GRHL3Q8TE85 626 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RPUSD4Q96CM3 377 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 TM4SF19Q96DZ7 209 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF703Q9H7S9 590 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CXXC1Q9P0U4 656 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CGGBP1Q9UFW8 167 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CD84Q9UIB8 345 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 COL5A1P20908 1838 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 FEZF1A0PJY2 475 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 TMPRSS2O15393 492 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 LILRA1O75019 489 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 RAD51DO75771 328 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CSN2P05814 226 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GIMD1P0DJR0 217 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ACRP10323 421 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 SLC25A6P12236 298 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CTSEP14091 401 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GNB3P16520 340 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 AADACP22760 399 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GLRA1P23415 457 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 GALR1P47211 349 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF41P51814 821 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM50BP56557 158 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 VAMP2P63027 116 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 C4orf17Q53FE4 359 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CLLU1OSQ5K130 101 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ADAMTSL4Q6UY14 1074 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 BATF2Q8N1L9 274 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 OR2C3Q8N628 320 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF248Q8NDW4 579 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 CADM4Q8NFZ8 388 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 SOCS4Q8WXH5 440 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ARRDC3Q96B67 414 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 NUDT11Q96G61 164 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 SMAD5Q99717 465 aaKnown RBP4.19□□□□□ -1.74
PRKD3-210ENST00000494667 VAMP8Q9BV40 100 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 ULBP3Q9BZM4 244 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 MOB1AQ9H8S9 216 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 MMP25Q9NPA2 562 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 LAMTOR2Q9Y2Q5 125 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 SCN3AQ9NY46 2000 aa4.19□□□□□ -1.74
PRKD3-210ENST00000494667 LOC107986453A0A1B0GWG9 222 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 OR5B21A6NL26 309 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms