RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ASPHD2Q6ICH7 369 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 FAM220AQ7Z4H9 259 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 THNSL2Q86YJ6 484 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 ASCC1Q8N9N2 400 aaKnown RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 BEND2Q8NDZ0 799 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 OR5R1Q8NH85 324 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 PPP1R35Q8TAP8 253 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 TRUB1Q8WWH5 349 aaKnown RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 RNF166Q96A37 237 aaPredicted RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 BORCS8Q96FH0 119 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 EAF1Q96JC9 268 aaPredicted RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 ARPC5LQ9BPX5 153 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 PKIBQ9C010 78 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 MEGF9Q9H1U4 602 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 HEXA-AS1Q9H8Q6 139 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 HES4Q9HCC6 221 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 TCF7L1Q9HCS4 588 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 FRRS1LQ9P0K9 344 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.81□□□□□ -1.16
MSH5-218ENST00000494646 SIGLEC9Q9Y336 463 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 ORC6Q9Y5N6 252 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 TET2Q6N021 2002 aaPredicted RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 LOC107986453A0A1B0GWG9 222 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 A6NHS1 94 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 DHRS7CA6NNS2 312 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 H3BNX3 289 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 J3QLW9 94 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 K7N7A8 449 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 EI24O14681 340 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 GATBO75879 557 aaKnown RBP7.8□□□□□ -1.16
MSH5-218ENST00000494646 ALPLP05186 524 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 CHRM2P08172 466 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 ZNF19P17023 458 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 NPBWR2P48146 333 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 ATP1B3P54709 279 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 EDDM3BP56851 147 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 NANOS3P60323 173 aaKnown RBP7.8□□□□□ -1.16
MSH5-218ENST00000494646 IL24Q13007 206 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 MIDNQ504T8 468 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 SLC25A26Q70HW3 274 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 RNF144BQ7Z419 303 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 LHFPL4Q7Z7J7 247 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 LHFPL3Q86UP9 236 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 TPRX1Q8N7U7 411 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 OR52N4Q8NGI2 321 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 OR2G2Q8NGZ5 317 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 EMG1Q92979 244 aaKnown RBP7.8□□□□□ -1.16
MSH5-218ENST00000494646 RFT1Q96AA3 541 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 ADAT3Q96EY9 351 aaPredicted RBP7.8□□□□□ -1.16
MSH5-218ENST00000494646 HRASLS5Q96KN8 279 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 CEP19Q96LK0 163 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 FAM234AQ9H0X4 552 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 C16orf95Q9H693 158 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 USE1Q9NZ43 259 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 IL36RNQ9UBH0 155 aa7.8□□□□□ -1.16
MSH5-218ENST00000494646 IGKV1-9A0A0C4DH69 117 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 hCG_1809904A0A1W2PP81 198 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 A0A1W2PPE2 198 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 A0A1W2PR64 198 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 A0A1W2PRV1 198 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 C17orf98A8MV24 154 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 J3QRE1 110 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 M0QZ24 198 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 TIMM23O14925 209 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 ZNF737O75373 536 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 TSPAN9O75954 239 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 IGHA1P01876 353 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 ARG1P05089 322 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 HTR1AP08908 422 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 UBCP0CG48 685 aaKnown RBP7.79□□□□□ -1.16
MSH5-218ENST00000494646 ATF1P18846 271 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 BCL3P20749 454 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 POU3F4P49335 361 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 RBP2P50120 134 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 ALDH3A2P51648 485 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 DLX6P56179 175 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 MTCP1P56278 107 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 ISL1P61371 349 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 EDDM3AQ14507 147 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 TMEM244Q5VVB8 128 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 CCDC121Q6ZUS5 278 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 GDPD3Q7L5L3 318 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 DYNAPQ8N1N2 210 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 CBR4Q8N4T8 237 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 C11orf44Q8N8P7 122 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 OR10AC1Q8NH08 325 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 FAM110DQ8TAY7 271 aaPredicted RBP7.79□□□□□ -1.16
MSH5-218ENST00000494646 ANAPC16Q96DE5 110 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 SNX22Q96L94 193 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 SPACA5Q96QH8 159 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 NKX3-1Q99801 234 aaPredicted RBP7.79□□□□□ -1.16
MSH5-218ENST00000494646 SLC29A1Q99808 456 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 CHST5Q9GZS9 411 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 AMBNQ9NP70 447 aa7.79□□□□□ -1.16
MSH5-218ENST00000494646 RBFOX1Q9NWB1 397 aaKnown RBP7.79□□□□□ -1.16
MSH5-218ENST00000494646 EXOGQ9Y2C4 368 aaKnown RBP7.79□□□□□ -1.16
MSH5-218ENST00000494646 GMPPBQ9Y5P6 360 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms