RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 DYDC1Q8WWB3 177 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 SPSB1Q96BD6 273 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 SH3GL1Q99961 368 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 WACQ9BTA9 647 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 HCAR1Q9BXC0 346 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 POLR2J2Q9GZM3 115 aaKnown RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 SIRPDQ9H106 197 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 POLR2J3Q9H1A7 115 aaKnown RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 NMNAT1Q9HAN9 279 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 ADA2Q9NZK5 511 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 POLR1DQ9Y2S0 133 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 N6AMT1Q9Y5N5 214 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 IER3IP1Q9Y5U9 82 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 LHFPL6Q9Y693 200 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 A0A0G2JND7 137 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 A0A1B0GW55 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 HTR3EA5X5Y0 456 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 C5orf63A6NC05 138 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ANKRD61A6NGH8 418 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ANXA2P2A6NMY6 339 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 FXYD1O00168 92 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 LGALS8O00214 317 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 KDM4BO94953 1096 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 FSTL3O95633 263 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF682O95780 498 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ACSM4P0C7M7 580 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L2P0CJ85 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L3P0CJ86 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L4P0CJ87 422 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L5P0CJ88 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L6P0CJ89 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L7P0CJ90 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 T-ENOLP0DO92 83 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ANOS1P23352 680 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 MPZP25189 248 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 CD200P41217 278 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 CD81P60033 236 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 HIST1H3AP68431 136 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 KRR1Q13601 381 aaKnown RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 OR8G1Q15617 311 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ANKDD1AQ495B1 522 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 BEND6Q5SZJ8 279 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 HIST2H3PS2Q5TEC6 136 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4L9Q6RFH8 374 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 GDPGP1Q6ZNW5 385 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 TMPRSS11FQ6ZWK6 438 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 MBOAT2Q6ZWT7 520 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 HIST2H3AQ71DI3 136 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 PGAP1Q75T13 922 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 FAM122BQ7Z309 247 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 VMO1Q7Z5L0 202 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 TSEN54Q7Z6J9 526 aaKnown RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 RNF113BQ8IZP6 322 aaKnown RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 OR6V1Q8N148 313 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 LYG1Q8N1E2 194 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 PNKDQ8N490 385 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 OR8J3Q8NGG0 315 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 OR5T2Q8NGG2 359 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 SETD6Q8TBK2 473 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ACOT11Q8WXI4 607 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 LZICQ8WZA0 190 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 SEH1LQ96EE3 360 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 PRRC1Q96M27 445 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 INTS14Q96SY0 518 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 CCL13Q99616 98 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 PITX2Q99697 317 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 NSRP1Q9H0G5 558 aaKnown RBP4.19□□□□□ -1.74
PTCD3-219ENST00000494323 PPA2Q9H2U2 334 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 C16orf95Q9H693 158 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 FN3KRPQ9HA64 309 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 SIRT7Q9NRC8 400 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 C1orf123Q9NWV4 160 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 ONECUT1Q9UBC0 465 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 DUX4Q9UBX2 424 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 B9D1Q9UPM9 204 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 FOXJ3Q9UPW0 622 aa4.19□□□□□ -1.74
PTCD3-219ENST00000494323 TRAV38-1A0A0B4J264 116 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 A0A1B0GWJ7 208 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 GGT3PA6NGU5 568 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 CD300LBA8K4G0 201 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 RNASEK-C17orf49H0YIS7 233 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 MRASO14807 208 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 PIN1P1O15428 100 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 NDUFA2O43678 99 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 NDUFB2O95178 105 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 PPP1R3DO95685 299 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 LHBP01229 141 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 TFF1P04155 84 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 IFNW1P05000 195 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 OR2T7P0C7T2 308 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 MYOD1P15172 320 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 PAX6P26367 422 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 GGT2P36268 569 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 TGFBR2P37173 567 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 MDH1P40925 334 aaKnown RBP4.18□□□□□ -1.74
PTCD3-219ENST00000494323 FXYD6P3P58550 94 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
PTCD3-219ENST00000494323 GMFBP60983 142 aa4.18□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF92Q03936 586 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms