RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 RGS9O75916 674 aaPredicted RBP10.38□□□□□ -0.75
TRA2A-209ENST00000494255 GABRA5P31644 462 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 ZNF93P35789 620 aaPredicted RBP10.38□□□□□ -0.75
TRA2A-209ENST00000494255 ZP1P60852 638 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 IKZF1Q13422 519 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 INSL4Q14641 139 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 ZNF788Q6ZQV5 615 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 RNF144BQ7Z419 303 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 FAM58AQ8N1B3 248 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 GAFA1Q96PS6 74 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 FAM192AQ9GZU8 254 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 SHARPINQ9H0F6 387 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 SLITRK2Q9H156 845 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 ELL3Q9HB65 397 aaPredicted RBP10.38□□□□□ -0.75
TRA2A-209ENST00000494255 RHOFQ9HBH0 211 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 RBFOX1Q9NWB1 397 aaKnown RBP10.38□□□□□ -0.75
TRA2A-209ENST00000494255 LPAR3Q9UBY5 353 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 GLS2Q9UI32 602 aa10.38□□□□□ -0.75
TRA2A-209ENST00000494255 J3QLI3 93 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 GABRPO00591 440 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 PIN1P1O15428 100 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 KDM4BO94953 1096 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 TFF1P04155 84 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 MAS1P04201 325 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 PRKACAP17612 351 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 PRDX2P32119 198 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 NPBWR2P48146 333 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 CAPZA1P52907 286 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 C11orf91Q3C1V1 193 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 HSD17B12Q53GQ0 312 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 BTNL3Q6UXE8 466 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 ZNF561Q8N587 486 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 JAGN1Q8N5M9 183 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 NKAIN3Q8N8D7 197 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 TMEM185AQ8NFB2 350 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 PXT1Q8NFP0 134 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 PHYHIPQ92561 330 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 SDSLQ96GA7 329 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 S100A13Q99584 98 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 BEX2Q9BXY8 128 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
TRA2A-209ENST00000494255 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 CDC42EP3Q9UKI2 254 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
TRA2A-209ENST00000494255 IGHV2-70DA0A0C4DH43 119 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 IGKV1-12A0A0C4DH73 117 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 A0A1B0GW55 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 F8VVB4 439 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 F8VWA3 439 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 GPR37O15354 613 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
TRA2A-209ENST00000494255 SC5DO75845 299 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 ARL6IP5O75915 188 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 ECDO95905 644 aaPredicted RBP10.36□□□□□ -0.75
TRA2A-209ENST00000494255 IGKV1D-12P01611 117 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 UCHL1P09936 223 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L2P0CJ85 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L3P0CJ86 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L4P0CJ87 422 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L5P0CJ88 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L6P0CJ89 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L7P0CJ90 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 AMY2BP19961 511 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 PTGFRP43088 359 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 BMXP51813 675 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 RSU1Q15404 277 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 CHRFAM7AQ494W8 412 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 SPIN3Q5JUX0 258 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 FAM120AOSQ5T036 256 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 FAM27D1Q5T7N8 215 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 CRIP3Q6Q6R5 217 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4L9Q6RFH8 374 aaPredicted RBP10.36□□□□□ -0.75
TRA2A-209ENST00000494255 CDH26Q8IXH8 852 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 TEX29Q8N6K0 151 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 TSPAN14Q8NG11 270 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 RAB40AQ8WXH6 277 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 NUDT16L1Q9BRJ7 211 aaKnown RBP10.36□□□□□ -0.75
TRA2A-209ENST00000494255 MRI1Q9BV20 369 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 HMG20AQ9NP66 347 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 MMP26Q9NRE1 261 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 DUX4Q9UBX2 424 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 SF3B6Q9Y3B4 125 aaKnown RBP10.36□□□□□ -0.75
TRA2A-209ENST00000494255 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 ARHGAP32A7KAX9 2087 aa10.36□□□□□ -0.75
TRA2A-209ENST00000494255 A0A087WXM4 84 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 MAGEA13PA6NCF6 341 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 CCRL2O00421 344 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 CHRM2P08172 466 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 CALCBP10092 127 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 SELLP14151 372 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 NDUFB7P17568 137 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 OR3A4PP47883 348 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 CEBPDP49716 269 aaPredicted RBP10.35□□□□□ -0.75
TRA2A-209ENST00000494255 SNU13P55769 128 aaKnown RBP10.35□□□□□ -0.75
TRA2A-209ENST00000494255 CAV3P56539 151 aa10.35□□□□□ -0.75
TRA2A-209ENST00000494255 NEDD8Q15843 81 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms