RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 NXPH2O95156 264 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 HPXP02790 462 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 INHBBP09529 407 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 PRKACAP17612 351 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 CPT2P23786 658 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 PIGYQ3MUY2 71 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 BAIAP2L2Q6UXY1 529 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 FAM89BQ8N5H3 189 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 GCSAMQ8N6F7 178 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 OR56B1Q8NGI3 324 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 OR51T1Q8NGJ9 327 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 IGFBPL1Q8WX77 278 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 HPS1Q92902 700 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 PHF21AQ96BD5 680 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 POM121Q96HA1 1249 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 SOSTQ9BQB4 213 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 DIABLOQ9NR28 239 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 ST3GAL6Q9Y274 331 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 TACC2O95359 2948 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 CACNA1DQ01668 2161 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 IGHV1-69-2A0A0G2JMI3 117 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A10PA6NDY2 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A18PA6NE21 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A16PA6NEW6 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FABP12A6NFH5 140 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A20PA6NIJ5 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A8PA6NJQ4 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A7PA6NKC0 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 LRRC30A6NM36 301 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A22PA8MWA6 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A12PA8MX19 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A5PA8MXJ8 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A23PA8MXZ1 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 CLDN25C9JDP6 229 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 IFNL4K9M1U5 179 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 RAB27BO00194 218 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 GEMIN2O14893 280 aaKnown RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 XRCC3O43542 346 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 LHBP01229 141 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 CHRM2P08172 466 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A15PP0C7V4 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A13PP0C7W8 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A14PP0C7W9 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM90A24PP0C7X0 464 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 IRF2P14316 349 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 EGR1P18146 543 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 GLRA1P23415 457 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 MNDAP41218 407 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 NR4A2P43354 598 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 PITPNBP48739 271 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 VEGFCP49767 419 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 GMFBP60983 142 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 HOXA4Q00056 320 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF45Q02386 682 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 MADCAM1Q13477 382 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 IL13RA2Q14627 380 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 TAF9Q16594 264 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF181Q2M3W8 571 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 SMIM21Q3B7S5 101 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 MOGAT2Q3SYC2 334 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 TMEM69Q5SWH9 247 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 RAB12Q6IQ22 244 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 METAP1DQ6UB28 335 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FIP1L1Q6UN15 594 aaKnown RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FAM131AQ6UXB0 335 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 ACP7Q6ZNF0 438 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 LINC00596Q86U02 117 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 TGIF2LYQ8IUE0 185 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 IZUMO1Q8IYV9 350 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 DTX3Q8N9I9 347 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 NUDT16L1Q9BRJ7 211 aaKnown RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
MCF2L-231ENST00000494043 WDR13Q9H1Z4 485 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 RASL12Q9NYN1 266 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 IL36RNQ9UBH0 155 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 NPTNQ9Y639 398 aa9.6□□□□□ -0.87
MCF2L-231ENST00000494043 FBN2P35556 2912 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 CENPEQ02224 2701 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 A0A0G2JMP0 313 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 A0A0X1KG70 313 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 FOXI3A8MTJ6 420 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 OVOL3O00110 214 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 SOCS1O15524 211 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 TPPPO94811 219 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 CYB5R3P00387 301 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 GABRR1P24046 479 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 PTBP1P26599 531 aaKnown RBP eCLIP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 SSTR2P30874 369 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 RBMXP38159 391 aaKnown RBP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 CDKN1AP38936 164 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 PTH2RP49190 550 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 SNU13P55769 128 aaKnown RBP9.59□□□□□ -0.87
MCF2L-231ENST00000494043 TAS2R20P59543 309 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 IL18Q14116 193 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF846Q147U1 533 aa9.59□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF79Q15937 498 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms