RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PLA2G7Q13093 441 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 EIF2B1Q14232 305 aaKnown RBP9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 SWI5Q1ZZU3 235 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 POMZP3Q6PJE2 187 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 OPN5Q6U736 354 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 DGAT2L6Q6ZPD8 337 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 GRINAQ7Z429 371 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 ANGPTL5Q86XS5 388 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 PAQR4Q8N4S7 273 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 JAGN1Q8N5M9 183 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 OR10R2Q8NGX6 335 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 LYPD6BQ8NI32 183 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 TMEM234Q8WY98 164 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 DVL3Q92997 716 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 TAAR8Q969N4 342 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 MALSU1Q96EH3 234 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 C2orf50Q96LR7 162 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 TSSK2Q96PF2 358 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 USB1Q9BQ65 265 aaKnown RBP9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 OCSTAMPQ9BR26 566 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 TREM1Q9NP99 234 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 DEPPQ9NTK1 212 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 OR52A1Q9UKL2 312 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 ROS1P08922 2347 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 TENM1Q9UKZ4 2725 aa9.21□□□□□ -0.93
PDLIM1-205ENST00000493949 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
PDLIM1-205ENST00000493949 C5orf51A6NDU8 294 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 AHSA1O95433 338 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 ACTL6AO96019 429 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 HLA-DQA2P01906 255 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 MT-ND4LP03901 98 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 CSTBP04080 98 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 CLPSP04118 112 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 F13BP05160 661 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 CD5P06127 495 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM157CP0CG43 387 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 PTAFRP25105 342 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 CEACAM8P31997 349 aaPredicted RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 SERPINF1P36955 418 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 SUCLG1P53597 346 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 PNLIPRP2P54317 469 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 RAB1AP62820 205 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 QRFPP83859 136 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 ECH1Q13011 328 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 PDZK1IP1Q13113 114 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 MELKQ14680 651 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 NSDHLQ15738 373 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 ACKR1Q16570 336 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 KRTAP24-1Q3LI83 254 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 SEM1Q6ZVN7 128 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF561Q8N587 486 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 LFNGQ8NES3 379 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC26A10Q8NG04 563 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 OR5D14Q8NGL3 314 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 OR8K3Q8NH51 312 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 KCNG3Q8TAE7 436 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 LINC01560Q8TB33 94 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 RNF133Q8WVZ7 376 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 ST8SIA1Q92185 356 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 KTI12Q96EK9 354 aaPredicted RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 URM1Q9BTM9 101 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 PLEKHA2Q9HB19 425 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 RHOFQ9HBH0 211 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 G6PC2Q9NQR9 355 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 CYTL1Q9NRR1 136 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 LANCL2Q9NS86 450 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 MRPL22Q9NWU5 206 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 METTL1Q9UBP6 276 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 GPR132Q9UNW8 380 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 CLDN16Q9Y5I7 305 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 FLVCR1Q9Y5Y0 555 aa9.21□□□□□ -0.94
PDLIM1-205ENST00000493949 A0A1B0GW64 132 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM235A6NFC5 223 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM166BA8MTA8 275 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF705EA8MWA4 302 aaPredicted RBP9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 G3V3Y1 287 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 GATCO43716 136 aaKnown RBP9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC16A7O60669 478 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 PNPP00491 289 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 BMP5P22003 454 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 VAMP1P23763 118 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 S100PP25815 95 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 ABCD3P28288 659 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 ALDH3B1P43353 468 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 CCR4P51679 360 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 UCP2P55851 309 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC37A1P57057 533 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM3AP98173 230 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 SMCO1Q147U7 214 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 RHEBQ15382 184 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 CD226Q15762 336 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 SGCAQ16586 387 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM76BQ5HYJ3 339 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 KLHL24Q6TFL4 600 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 HIST2H3AQ71DI3 136 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 LHFPL1Q86WI0 220 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms