RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RAB6AP20340 208 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 TMEM33P57088 247 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 FAM189A2Q15884 450 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 CNPY1Q3B7I2 92 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 TEX36Q5VZQ5 186 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 MZT2AQ6P582 158 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 PEG10Q86TG7 708 aaKnown RBP15.65■□□□□ 0.1
MCF2L-230ENST00000491028 OR51T1Q8NGJ9 327 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 PERPQ96FX8 193 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 POM121Q96HA1 1249 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 TMEM59Q9BXS4 323 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 DCAF16Q9NXF7 216 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 DNAJB11Q9UBS4 358 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 A3GALT2U3KPV4 340 aa15.65■□□□□ 0.1
MCF2L-230ENST00000491028 A0A075B6Q4 140 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 PPIAL4EA0A075B759 164 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 A0A1W2PP11 408 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 OOEPA6NGQ2 149 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 PPIAL4DF5H284 164 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 F8VVB4 439 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 F8VWA3 439 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 LGALS8O00214 317 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 WNT9BO14905 357 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 SSX4O60224 188 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 MPIG6BO95866 241 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 PAHP00439 452 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 KNG1P01042 644 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 PPIAL4FP0DN26 164 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 MUC1P15941 1255 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-230ENST00000491028 CD80P33681 288 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 PDLIM4P50479 330 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 UNC119Q13432 240 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 IL13RA2Q14627 380 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 ZNF404Q494X3 552 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 SPIN3Q5JUX0 258 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 LINC00596Q86U02 117 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 BATF2Q8N1L9 274 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 BOLLQ8N9W6 283 aaKnown RBP15.64■□□□□ 0.09
MCF2L-230ENST00000491028 TMEM104Q8NE00 496 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 TIMD4Q96H15 378 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 NXF2Q9GZY0 626 aaKnown RBP15.64■□□□□ 0.09
MCF2L-230ENST00000491028 WDR13Q9H1Z4 485 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 KCNK15Q9H427 330 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 NLKQ9UBE8 527 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 RAB22AQ9UL26 194 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 PPIAL4AQ9Y536 164 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 UNC79Q9P2D8 2635 aa15.64■□□□□ 0.09
MCF2L-230ENST00000491028 AKAP6Q13023 2319 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 USF3Q68DE3 2245 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 TRAV38-1A0A0B4J264 116 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 NDUFS8O00217 210 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 RBM11P57052 281 aaKnown RBP15.63■□□□□ 0.09
MCF2L-230ENST00000491028 GMFBP60983 142 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 BTG1P62324 171 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 RPS27AP62979 156 aaKnown RBP15.63■□□□□ 0.09
MCF2L-230ENST00000491028 ZNF146Q15072 292 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 KCNJ8Q15842 424 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 MICBQ29980 383 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 OR10K2Q6IF99 312 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 ZNF525Q8N782 197 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 MCFD2Q8NI22 146 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 RAB1CQ92928 201 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 FAM46BQ96A09 425 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 Q96M66 194 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 CMTM3Q96MX0 182 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 URM1Q9BTM9 101 aaKnown RBP15.63■□□□□ 0.09
MCF2L-230ENST00000491028 BANF2Q9H503 90 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 SEBOXQ9HB31 216 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-230ENST00000491028 APCP25054 2843 aa15.63■□□□□ 0.09
MCF2L-230ENST00000491028 TACC2O95359 2948 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A10PA6NDY2 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A18PA6NE21 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A16PA6NEW6 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A20PA6NIJ5 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A8PA6NJQ4 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A7PA6NKC0 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A22PA8MWA6 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A12PA8MX19 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A5PA8MXJ8 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A23PA8MXZ1 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A15PP0C7V4 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A13PP0C7W8 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A14PP0C7W9 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM90A24PP0C7X0 464 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 CPT2P23786 658 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 GIFP27352 417 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 DSCR9P59020 149 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 MPV17LQ2QL34 196 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 FAM201AQ5SY85 155 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 CLEC2AQ6UVW9 174 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 OR5H6Q8NGV6 325 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 TM2D1Q9BX74 207 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 SELENOIQ9C0D9 397 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 LPAR5Q9H1C0 372 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 MMP27Q9H306 513 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 PTTG2Q9NZH5 202 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 COMMD3Q9UBI1 195 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 GLS2Q9UI32 602 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 ST3GAL6Q9Y274 331 aa15.62■□□□□ 0.09
MCF2L-230ENST00000491028 WIPI2Q9Y4P8 454 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms