RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 NDUFS6O75380 124 aaKnown RBP11.32□□□□□ -0.6
SHOX2-205ENST00000490689 P04436 131 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 B4GALT1P15291 398 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 TCN2P20062 427 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 FGF7P21781 194 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 ATP6V0CP27449 155 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 NOVA1P51513 510 aaKnown RBP11.32□□□□□ -0.6
SHOX2-205ENST00000490689 HLA-DRB3P79483 266 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 SHBQ15464 509 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 CYB5R2Q6BCY4 276 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 BAGE3Q86Y29 109 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 BAGE2Q86Y30 109 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 NOXO1Q8NFA2 376 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 OR1N1Q8NGS0 311 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 LRRC61Q9BV99 259 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 TRAPPC2LQ9UL33 140 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 FTCDNL1E5RQL4 147 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 SMIM10L1P0DMW3 83 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ADCYAP1P18509 176 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 PLGLB1Q02325 96 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ASB10Q8WXI3 467 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 SMIM10Q96HG1 83 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 AQP10Q96PS8 301 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ALKBH3Q96Q83 286 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 FAM117AQ9C073 453 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 A0A1B0GTI1 187 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 MEX3AA1L020 520 aaKnown RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 XKRY2A2RUG3 117 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 LINC01565O15544 149 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF658BQ4V348 819 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 C1orf100Q5SVJ3 147 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 SLC2A9Q9NRM0 540 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 SRPK3Q9UPE1 567 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 DIDO1Q9BTC0 2240 aaKnown RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 TCAPO15273 167 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 METTL15P1P0C7V9 234 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 RAC2P15153 192 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 MSX1P28360 303 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 DYNLT3P51808 116 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 MRPS21P82921 87 aaKnown RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ROM1Q03395 351 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF154Q13106 437 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 PMS2P11Q13670 270 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 SURF2Q15527 256 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 MAML2Q8IZL2 1156 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 OSR2Q8N2R0 312 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 UTP23Q9BRU9 249 aaKnown RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 LMAN1LQ9HAT1 526 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 PHF3Q92576 2039 aaKnown RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ZSWIM8A7E2V4 1837 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 DOCK9Q9BZ29 2069 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 WDR87Q6ZQQ6 2873 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 NKX2-6A6NCS4 301 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 HEXAP06865 529 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 CTSDP07339 412 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF708P17019 499 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 PTGER4P35408 488 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 HTD2P86397 168 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 OR10G3Q8NGC4 313 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 COA4Q9NYJ1 87 aa11.31□□□□□ -0.6
SHOX2-205ENST00000490689 MTCL1Q9Y4B5 1905 aaKnown RBP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 LINC01387J3KSC0 135 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 TMEM92Q6UXU6 159 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 YRDCQ86U90 279 aaKnown RBP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF100Q8IYN0 542 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 OXGR1Q96P68 337 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 KCNIP1Q9NZI2 227 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 A0A1W2PPE3 182 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 TGFBR3LH3BV60 316 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 DHHO43323 396 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 EIF1BO60739 113 aaKnown RBP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 EIF1P41567 113 aaKnown RBP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 TAS2R30P59541 319 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 UBE2G2P60604 165 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 FZD2Q14332 565 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 PP6455Q8WZ26 134 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 LANCL2Q9NS86 450 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 PTPRZ1P23471 2315 aaPredicted RBP11.3□□□□□ -0.6
SHOX2-205ENST00000490689 MBP02144 154 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 FSTP19883 344 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 ACKR3P25106 362 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 Q3ZCU0 254 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 FAM234AQ9H0X4 552 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 OBP2AQ9NY56 170 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 TMED3Q9Y3Q3 217 aa11.3□□□□□ -0.6
SHOX2-205ENST00000490689 C3orf85A0A1B0GTC6 90 aa11.29□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF320A2RRD8 509 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms