RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 SLC6A6P31641 620 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 PYCR1P32322 319 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ACVR1BP36896 505 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 MNDAP41218 407 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 CSNK1A1P48729 337 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 GDI2P50395 445 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 CCR6P51684 374 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 GBX2P52951 348 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 BLVRAP53004 296 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR12D2P58182 307 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 MRPS10P82664 201 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 EGR4Q05215 589 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ZP4Q12836 540 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SNTB2Q13425 540 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SNTB1Q13884 538 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF74Q16587 644 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF260Q3ZCT1 412 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ALG10Q5BKT4 473 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SLC35D3Q5M8T2 416 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 FAM27D1Q5T7N8 215 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ATPAF1Q5TC12 328 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 CARD17Q5XLA6 110 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OLFML2AQ68BL7 652 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 RPL22L1Q6P5R6 122 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SLC22A25Q6T423 547 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 WDR88Q6ZMY6 472 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SLC35D2Q76EJ3 337 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 CDC20BQ86Y33 519 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF433Q8N7K0 673 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ACBD4Q8NC06 268 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR13C2Q8NGS9 318 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR2T4Q8NH00 348 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR2T27Q8NH04 317 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR52N5Q8NH56 324 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR6X1Q8NH79 312 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 PFN4Q8NHR9 129 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 C15orf40Q8WUR7 153 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 RAB40AQ8WXH6 277 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 NSMAFQ92636 917 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 GHSRQ92847 366 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 RBPMSQ93062 196 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SLC25A44Q96H78 314 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF385AQ96PM9 386 aaKnown RBP4.04□□□□□ -1.76
CSTF1-205ENST00000490539 CCL19Q99731 98 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 IFT27Q9BW83 186 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 ULBP2Q9BZM5 246 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 C20orf85Q9H1P6 137 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 OR51V1Q9H2C8 321 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 UBTD1Q9HAC8 227 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 CRLF2Q9HC73 371 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 HRASLSQ9HDD0 168 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 SLC7A10Q9NS82 523 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 C20orf141Q9NUB4 165 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 DECR2Q9NUI1 292 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 RNF115Q9Y4L5 304 aa4.04□□□□□ -1.76
CSTF1-205ENST00000490539 IGKV1D-42A0A075B6H8 117 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 TRAV27A0A087WT01 109 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.03□□□□□ -1.76
CSTF1-205ENST00000490539 hCG_1807616A0A1W2PRN6 198 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ANKRD20A5PA0PJZ0 165 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 SLC22A23A1A5C7 686 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 NPIPB13A6NJU9 1138 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF814B7Z6K7 855 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 NPIPB4C9JG80 1138 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 GABARAPH6UMI1 98 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 M0R1B8 84 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 M0R233 179 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 AIPO00170 330 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 SMPD2O60906 423 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 B3GALNT1O75752 331 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 OR2A4O95047 310 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 PPP1R3DO95685 299 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 CFDP00746 253 aaPredicted RBP4.03□□□□□ -1.76
CSTF1-205ENST00000490539 BGLAPP02818 100 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 MRPL3P09001 348 aaKnown RBP4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ASAH2BP0C7U1 165 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 OR8G3PP0DMU2 310 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 CALCBP10092 127 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF250P15622 560 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ZP3P21754 424 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 IGHV1-2P23083 117 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 EDNRAP25101 427 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 CALCRP30988 508 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ARR3P36575 388 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 ZNF83P51522 516 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 BIDP55957 195 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 SELENOVP59797 346 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 PCBD1P61457 104 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 TSPAN5P62079 268 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 RPS11P62280 158 aaKnown RBP eCLIP4.03□□□□□ -1.76
CSTF1-205ENST00000490539 VAMP2P63027 116 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 RPL18Q07020 188 aaKnown RBP4.03□□□□□ -1.76
CSTF1-205ENST00000490539 LGALS3BPQ08380 585 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 CRMP1Q14194 572 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 OPCMLQ14982 345 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 NHLRC3Q5JS37 347 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 THEM4Q5T1C6 240 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 TSPO2Q5TGU0 170 aa4.03□□□□□ -1.76
CSTF1-205ENST00000490539 C9orf135Q5VTT2 229 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms