RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MDFIC2A0A1B0GVS7 189 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 ZNF732B4DXR9 585 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 SYT7O43581 403 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 XPNPEP2O43895 674 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 GABARAPO95166 117 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 NRASP01111 189 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 HTR1AP08908 422 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 OCM2P0CE71 109 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 OCMP0CE72 109 aaPredicted RBP8.54□□□□□ -1.04
TTC28-207ENST00000490475 CCL1P22362 96 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 OMGP23515 440 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 IER3P46695 156 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 BMXP51813 675 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 ARF6P62330 175 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 CEACAM21Q3KPI0 293 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 FAM76BQ5HYJ3 339 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 NCR3LG1Q68D85 454 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 FDX2Q6P4F2 183 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 WDR82Q6UXN9 313 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 Q6ZSR3 168 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 SYS1Q8N2H4 156 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 ZBTB8BQ8NAP8 495 aaPredicted RBP8.54□□□□□ -1.04
TTC28-207ENST00000490475 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 BPIFB6Q8NFQ5 453 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 OR5R1Q8NH85 324 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 C8orf46Q8TAG6 207 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 SEH1LQ96EE3 360 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 CITED1Q99966 193 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 MMP27Q9H306 513 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 SMURF1Q9HCE7 757 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 INPP5EQ9NRR6 644 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 GPR173Q9NS66 373 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 SCN3BQ9NY72 215 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 CLEC2DQ9UHP7 191 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 ENPP5Q9UJA9 477 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 PAIP2BQ9ULR5 123 aaKnown RBP8.54□□□□□ -1.04
TTC28-207ENST00000490475 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
TTC28-207ENST00000490475 IGHV3OR15-7A0A075B7D8 119 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 OR4C45A6NMZ5 311 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 M0R1W7 72 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 GPR137BO60478 399 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 PAHP00439 452 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 TGFBR2P37173 567 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 CCR9P51686 369 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 CAV3P56539 151 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 GMFBP60983 142 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ACTA2P62736 377 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ACTG2P63267 376 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ACSM1Q08AH1 577 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ST3GAL4Q11206 333 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ALKBH1Q13686 389 aaKnown RBP8.53□□□□□ -1.04
TTC28-207ENST00000490475 DGUOKQ16854 277 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 PDLIM3Q53GG5 364 aaPredicted RBP8.53□□□□□ -1.04
TTC28-207ENST00000490475 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ZBTB37Q5TC79 503 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 OR2G6Q5TZ20 316 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 PLCXD3Q63HM9 321 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 RUSC1-AS1Q66K80 236 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 TMEM42Q69YG0 159 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 PRSS48Q7RTY5 328 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 VMO1Q7Z5L0 202 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 OR5A2Q8NGI9 324 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 OR10AC1Q8NH08 325 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 MRPL48Q96GC5 212 aaKnown RBP8.53□□□□□ -1.04
TTC28-207ENST00000490475 TMEM80Q96HE8 168 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 DCTN5Q9BTE1 182 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 OR51I2Q9H344 312 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 DUSP21Q9H596 190 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 ONECUT1Q9UBC0 465 aa8.53□□□□□ -1.04
TTC28-207ENST00000490475 DIMT1Q9UNQ2 313 aaKnown RBP8.53□□□□□ -1.04
TTC28-207ENST00000490475 LOC107986453A0A1B0GWG9 222 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 A0A1W2PPH5 198 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 FUOMA2VDF0 154 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 SLC1A7O00341 560 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 AKR7A2O43488 359 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 RHBDL1O75783 438 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 UBCP0CG48 685 aaKnown RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 C21orf33P30042 268 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 TGM4P49221 684 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 BCAP31P51572 246 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 GBX2P52951 348 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 GNG3P63215 75 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 DEFA6Q01524 100 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 UBE2V2Q15819 145 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 NEDD8Q15843 81 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 TAF9Q16594 264 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 SYT6Q5T7P8 510 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 TMEM244Q5VVB8 128 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 STUMQ69YW2 141 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 DHRS7BQ6IAN0 325 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 C11orf88Q6PI97 169 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 ZNF676Q8N7Q3 588 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 ZSCAN4Q8NAM6 433 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 OR51A4Q8NGJ6 313 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 OR5D13Q8NGL4 314 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 ZNF671Q8TAW3 534 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 FGGYQ96C11 551 aa8.52□□□□□ -1.05
TTC28-207ENST00000490475 ADAT3Q96EY9 351 aaPredicted RBP8.52□□□□□ -1.05
TTC28-207ENST00000490475 CCL13Q99616 98 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms