RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 ANGPTL7O43827 346 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 KNG1P01042 644 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 DUSP1P28562 367 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 CAPGP40121 348 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 RBP2P50120 134 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 GBX2P52951 348 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-214ENST00000490398 ATP1B3P54709 279 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 MTCP1P56278 107 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 COL10A1Q03692 680 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 HCP5Q6MZN7 132 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 FAM185AQ8N0U4 392 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 KIR3DL3Q8N743 410 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 DNAAF1Q8NEP3 725 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 MRPL48Q96GC5 212 aaKnown RBP14.86□□□□□ -0.03
COL9A3-214ENST00000490398 OPALINQ96PE5 141 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 C8orf4Q9NR00 106 aa14.86□□□□□ -0.03
COL9A3-214ENST00000490398 TRBV2A0A0J9YWF9 115 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 TMEM82A0PJX8 343 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 XPNPEP2O43895 674 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 ZNF737O75373 536 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 RNASE1P07998 156 aaKnown RBP14.85□□□□□ -0.03
COL9A3-214ENST00000490398 MELTFP08582 738 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 DCKP27707 260 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 SNU13P55769 128 aaKnown RBP14.85□□□□□ -0.03
COL9A3-214ENST00000490398 ZNF273Q14593 569 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 TMEM200BQ69YZ2 307 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 Q6YL49 198 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 EGFL6Q8IUX8 553 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 ZNF561Q8N587 486 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 OR5D18Q8NGL1 313 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 OR5AK2Q8NH90 309 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 RPS4Y2Q8TD47 263 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 GCDHQ92947 438 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-214ENST00000490398 ZDHHC16Q969W1 377 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 ZCCHC4Q9H5U6 513 aa14.85□□□□□ -0.03
COL9A3-214ENST00000490398 DIMT1Q9UNQ2 313 aaKnown RBP14.85□□□□□ -0.03
COL9A3-214ENST00000490398 ERICH4A6NGS2 130 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 TMEM212A6NML5 194 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 SLC1A7O00341 560 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 TK1P04183 234 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 PIPP12273 146 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-214ENST00000490398 CCL3L1P16619 93 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 PRKACBP22694 351 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 SOX2P48431 317 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 COMPP49747 757 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-214ENST00000490398 BPIFB3P59826 476 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 PDZK1IP1Q13113 114 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 CDK5R1Q15078 307 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 C12orf54Q6X4T0 127 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 LHFPL2Q6ZUX7 228 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 C11orf42Q8N5U0 333 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 ZNF485Q8NCK3 441 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 SETD9Q8NE22 299 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 OR52N4Q8NGI2 321 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 OR13C5Q8NGS8 318 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 FBLIM1Q8WUP2 373 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 EMG1Q92979 244 aaKnown RBP14.84□□□□□ -0.03
COL9A3-214ENST00000490398 SPSB1Q96BD6 273 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 ORAI1Q96D31 301 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 TMEM80Q96HE8 168 aa14.84□□□□□ -0.03
COL9A3-214ENST00000490398 NKX3-1Q99801 234 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-214ENST00000490398 CAB39Q9Y376 341 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-214ENST00000490398 TRBV23-1A0A0A0MS06 115 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 H0YAE9 185 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 CLDN34H7C241 214 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 K7N7A8 449 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 M0R1W7 72 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 MT-ND2P03891 347 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 CCDC159P0C7I6 412 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 SLC34A1Q06495 639 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 IL18R1Q13478 541 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 MKXQ8IYA7 352 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 CMTM4Q8IZR5 234 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 ZFP41Q8N8Y5 198 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 ASCC1Q8N9N2 400 aaKnown RBP14.83□□□□□ -0.04
COL9A3-214ENST00000490398 OR51A2Q8NGJ7 313 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 TFAP2CQ92754 450 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 DMRTB1Q96MA1 342 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 DCLRE1BQ9H816 532 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 DHDHQ9UQ10 334 aa14.83□□□□□ -0.04
COL9A3-214ENST00000490398 IGHV4-59P01825 116 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 HKR1P10072 659 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 CFPP27918 469 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 RPL31P62899 125 aaKnown RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 GABPB1Q06547 395 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 ST3GAL4Q11206 333 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 MRPL28Q13084 256 aaKnown RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 AWAT1Q58HT5 328 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 RPL22L1Q6P5R6 122 aaKnown RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 METAP1DQ6UB28 335 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 C17orf107Q6ZR85 190 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 C1orf122Q6ZSJ8 110 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 TCF23Q7RTU1 214 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 C8orf59Q8N0T1 100 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 FAM58AQ8N1B3 248 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 PARP16Q8N5Y8 322 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 TSEN15Q8WW01 171 aaKnown RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 C17orf50Q8WW18 174 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 SLC25A28Q96A46 364 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 CHIAQ9BZP6 476 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms