RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 P2RX4Q99571 388 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 SLC25A33Q9BSK2 321 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 CLEC7AQ9BXN2 247 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 PKIBQ9C010 78 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 TMEM133Q9H2Q1 129 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 CCDC134Q9H6E4 229 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 SEBOXQ9HB31 216 aaPredicted RBP6.51□□□□□ -1.37
USP39-216ENST00000490193 VNN3Q9NY84 501 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 OR14J1Q9UGF5 321 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 ENPP5Q9UJA9 477 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 HHLA2Q9UM44 414 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 SLC22A13Q9Y226 551 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 LINC00312Q9Y6C7 94 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 TMEM269A0A1B0GVZ9 245 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 hADV38S2A0JD32 116 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 M0QZK8 103 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 DLGAP1O14490 977 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 GSC2O15499 205 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 DHRS3O75911 302 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 IGLV1-47P01700 117 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 PRDX6P30041 224 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 MYCNOSP40205 109 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 GP2P55259 537 aaKnown RBP6.5□□□□□ -1.37
USP39-216ENST00000490193 EDDM3BP56851 147 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 RPL23AP62750 156 aaKnown RBP6.5□□□□□ -1.37
USP39-216ENST00000490193 BDH1Q02338 343 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 ROM1Q03395 351 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 IL24Q13007 206 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 MICAQ29983 383 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 KHDC1LQ5JSQ8 128 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 SLC35D3Q5M8T2 416 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 CLVS2Q5SYC1 327 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 KCTD18Q6PI47 426 aaPredicted RBP6.5□□□□□ -1.37
USP39-216ENST00000490193 Q6ZSR3 168 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 GDPD3Q7L5L3 318 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 KRT77Q7Z794 578 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 ZNF676Q8N7Q3 588 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 ASCC1Q8N9N2 400 aaKnown RBP6.5□□□□□ -1.37
USP39-216ENST00000490193 OR51E1Q8TCB6 317 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 CAPSLQ8WWF8 208 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 SNX22Q96L94 193 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 TEAD3Q99594 435 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 PBOV1Q9GZY1 135 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 MYLK2Q9H1R3 596 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 OR51V1Q9H2C8 321 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 GPR84Q9NQS5 396 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 ZFP57Q9NU63 452 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 DPM3Q9P2X0 92 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 NUFIP1Q9UHK0 495 aaKnown RBP6.5□□□□□ -1.37
USP39-216ENST00000490193 PIGLQ9Y2B2 252 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 HUWE1Q7Z6Z7 4374 aaKnown RBP6.5□□□□□ -1.37
USP39-216ENST00000490193 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 LYSTQ99698 3801 aa6.5□□□□□ -1.37
USP39-216ENST00000490193 ELOA3CA0A087WX78 387 aaPredicted RBP6.49□□□□□ -1.37
USP39-216ENST00000490193 TMEM82A0PJX8 343 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 DHRS7CA6NNS2 312 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 PRR23D1E9PI22 279 aaPredicted RBP6.49□□□□□ -1.37
USP39-216ENST00000490193 ZNF254O75437 659 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 E2F6O75461 281 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 CCDC159P0C7I6 412 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 PRR23D2P0DMB1 279 aaPredicted RBP6.49□□□□□ -1.37
USP39-216ENST00000490193 H2AFXP16104 143 aaPredicted RBP6.49□□□□□ -1.37
USP39-216ENST00000490193 CD24P25063 80 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 ARHGDIBP52566 201 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 SPATS1Q496A3 300 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 CASC10Q5T4H9 136 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 PLBD1Q6P4A8 553 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 OR2W3Q7Z3T1 314 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 RTN4RL2Q86UN3 420 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 COMMD2Q86X83 199 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 TEX47Q8TBZ9 253 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 ZNF596Q8TC21 504 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 ZNF649Q9BS31 505 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 YIPF3Q9GZM5 350 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 LAMP5Q9UJQ1 280 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP39-216ENST00000490193 PCDHGB5Q9Y5G0 923 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 V9GYS6 101 aa6.49□□□□□ -1.37
USP39-216ENST00000490193 MEX3AA1L020 520 aaKnown RBP6.48□□□□□ -1.37
USP39-216ENST00000490193 LEUTXA8MZ59 168 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 OOSP1A8MZH6 123 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 PSMD9O00233 223 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 SRSF10O75494 262 aaKnown RBP6.48□□□□□ -1.37
USP39-216ENST00000490193 MMP23AO75900 390 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 TTRP02766 147 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 SLC2A5P22732 501 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 CHATP28329 748 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 CD34P28906 385 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 ERP29P30040 261 aaKnown RBP6.48□□□□□ -1.37
USP39-216ENST00000490193 PPP1R8Q12972 351 aaKnown RBP6.48□□□□□ -1.37
USP39-216ENST00000490193 GK3PQ14409 553 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 ZNF829Q3KNS6 432 aaPredicted RBP6.48□□□□□ -1.37
USP39-216ENST00000490193 OR52W1Q6IF63 320 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 ASRGL1Q7L266 308 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 ZNF679Q8IYX0 411 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 PGAM4Q8N0Y7 254 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 BATF2Q8N1L9 274 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms