RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RNF183Q96D59 192 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 SPDL1Q96EA4 605 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 PRRC1Q96M27 445 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 LRGUKQ96M69 825 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 PARD6BQ9BYG5 372 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 PLEKHA3Q9HB20 300 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 ING3Q9NXR8 418 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 DNAJC27Q9NZQ0 273 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 RHCGQ9UBD6 479 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 TMEM5Q9Y2B1 443 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 AMMECR1Q9Y4X0 333 aaPredicted RBP8.83□□□□□ -1
HDAC6-233ENST00000489352 SHOXO15266 292 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 XRCC3O43542 346 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 MPZL2O60487 215 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 TXNDC12O95881 172 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 IFNA14P01570 189 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 CDK2P24941 298 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 PRR20EP86478 221 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 PRR20CP86479 221 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 PRR20DP86480 221 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 PRR20BP86481 221 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 PRR20AP86496 221 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 BAIAP2L2Q6UXY1 529 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 MBOAT2Q6ZWT7 520 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 ZBTB46Q86UZ6 589 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 BATF2Q8N1L9 274 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 TPRX1Q8N7U7 411 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 OR5A2Q8NGI9 324 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 TSEN15Q8WW01 171 aaKnown RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 GPX7Q96SL4 187 aaPredicted RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 TXLNGYQ9BZA5 131 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 FGF23Q9GZV9 251 aaPredicted RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 ALX4Q9H161 411 aaPredicted RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 KLK15Q9H2R5 256 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 MRPL22Q9NWU5 206 aaKnown RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 CCDC167Q9P0B6 97 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 POLDIP2Q9Y2S7 368 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 UBE2J1Q9Y385 318 aaPredicted RBP8.82□□□□□ -1
HDAC6-233ENST00000489352 WSB1Q9Y6I7 421 aa8.82□□□□□ -1
HDAC6-233ENST00000489352 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 TRBV5-3A0A0A0MS03 114 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 A0A0J9YWU9 116 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 OR5B21A6NL26 309 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 LY6LH3BQJ8 138 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 TPPPO94811 219 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 NDUFB8O95169 186 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 PEX2P28328 305 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 YAP1P46937 504 aaKnown RBP8.81□□□□□ -1
HDAC6-233ENST00000489352 CFHR3Q02985 330 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 KRT71Q3SY84 523 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 FGD3Q5JSP0 725 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 LCN12Q6JVE5 192 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 TBPL2Q6SJ96 375 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
HDAC6-233ENST00000489352 MOB3CQ70IA8 216 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 TCF23Q7RTU1 214 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 PROKR2Q8NFJ6 384 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 OR4K13Q8NH42 304 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 MYOZ3Q8TDC0 251 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 FLYWCH2Q96CP2 140 aaKnown RBP8.81□□□□□ -1
HDAC6-233ENST00000489352 SNX22Q96L94 193 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 FN3KQ9H479 309 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 PLEKHA1Q9HB21 404 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 ZNF286AQ9HBT8 521 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 NDE1Q9NXR1 346 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 SIGLEC7Q9Y286 467 aa8.81□□□□□ -1
HDAC6-233ENST00000489352 PKD1P98161 4303 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 A0A087WUU8 490 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 TRGV10A0A0A0MS01 117 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 TVP23AA6NH52 213 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 RGS11O94810 467 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 GABRR1P24046 479 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 ACKR3P25106 362 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 HAAOP46952 286 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 RAB9AP51151 201 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 ZNF121P58317 390 aaPredicted RBP8.8□□□□□ -1
HDAC6-233ENST00000489352 MTPNP58546 118 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 GRK1Q15835 563 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 HEPN1Q6WQI6 88 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 MREGQ8N565 214 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 FAM86B1Q8N7N1 296 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 MNS1Q8NEH6 495 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 OR4D6Q8NGJ1 314 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 PHLDA1Q8WV24 401 aaPredicted RBP8.8□□□□□ -1
HDAC6-233ENST00000489352 ITFG2Q969R8 447 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 TPD52L3Q96J77 140 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 TMEM120AQ9BXJ8 343 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 NIPAL2Q9H841 368 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 DNAH2Q9P225 4427 aa8.8□□□□□ -1
HDAC6-233ENST00000489352 HSPG2P98160 4391 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 DNAH11Q96DT5 4516 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 IGHV4OR15-8A0A075B7B6 117 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 A0A087WW49 117 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 ZNF737O75373 536 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 TFAP2AP05549 437 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 HIST1H1CP16403 213 aaKnown RBP8.79□□□□□ -1
HDAC6-233ENST00000489352 SOX6P35712 828 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 MAP2K3P46734 347 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 RAB7AP51149 207 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms