RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CYB5AP00167 134 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 TK1P04183 234 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 ISG15P05161 165 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 RPSAP08865 295 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 HTR1AP08908 422 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF20P17024 532 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 KIR3DL2P43630 455 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 RBP2P50120 134 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 CCR9P51686 369 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 ATP1B3P54709 279 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 IL18R1Q13478 541 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 MIDNQ504T8 468 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 OLFML2AQ68BL7 652 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 FDX2Q6P4F2 183 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 ANGPTL5Q86XS5 388 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 ASCC1Q8N9N2 400 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 DNAAF1Q8NEP3 725 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 UBE2FQ969M7 185 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF184Q99676 751 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 C19orf12Q9NSK7 152 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 EXOGQ9Y2C4 368 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 ANGPTL7O43827 346 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 CHRM2P08172 466 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 OCM2P0CE71 109 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 OCMP0CE72 109 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 DLX1P56177 255 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 OR12D2P58182 307 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 ADARB1P78563 741 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF91Q05481 1191 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 DHRS7BQ6IAN0 325 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 LHFPL2Q6ZUX7 228 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 UTS2BQ765I0 119 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 EGFL6Q8IUX8 553 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 ENTHD1Q8IYW4 607 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 C8orf59Q8N0T1 100 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 BATF2Q8N1L9 274 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 WFDC12Q8WWY7 111 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 TFAP2CQ92754 450 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 EMG1Q92979 244 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 SPSB1Q96BD6 273 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 HEXA-AS1Q9H8Q6 139 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 NEK6Q9HC98 313 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 RAB26Q9ULW5 256 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 HHLA2Q9UM44 414 aa11.29□□□□□ -0.6
SPTLC1-207ENST00000488921 IGKV1-27A0A075B6S5 117 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 J3QLW9 94 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 K7N7A8 449 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 FADS2O95864 444 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 DBTP11182 482 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF19P17023 458 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 PRKACBP22694 351 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 RELBQ01201 579 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 COL10A1Q03692 680 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 MRPL28Q13084 256 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 TAF9Q16594 264 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 SLC25A26Q70HW3 274 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 GDPD3Q7L5L3 318 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 MKXQ8IYA7 352 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 SLAMF9Q96A28 289 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 LGALS12Q96DT0 336 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 ALG8Q9BVK2 526 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 FRRS1LQ9P0K9 344 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 HSPE1-MOB4S4R3N1 261 aa11.28□□□□□ -0.6
SPTLC1-207ENST00000488921 RBP4P02753 201 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 GABRB1P18505 474 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 ATF1P18846 271 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 AZGP1P25311 298 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 TGFBR2P37173 567 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 MTCP1P56278 107 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 NANOS3P60323 173 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 RAB40BQ12829 278 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 ALKBH1Q13686 389 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 GALEQ14376 348 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF691Q5VV52 312 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 BRICD5Q6PL45 260 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 RDH10Q8IZV5 341 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 OR8H2Q8N162 312 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 SYS1Q8N2H4 156 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 PNKDQ8N490 385 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF676Q8N7Q3 588 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 OR4M1Q8NGD0 313 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 OR13C3Q8NGS6 347 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 HAVCR2Q8TDQ0 301 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 FGGYQ96C11 551 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 ADAT3Q96EY9 351 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms