RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 ZNF788Q6ZQV5 615 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 LRRTM1Q86UE6 522 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 ZNRF1Q8ND25 227 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 TNFAIP8L1Q8WVP5 186 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 ST8SIA4Q92187 359 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 EMG1Q92979 244 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 FAHD2AQ96GK7 314 aa14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 SSBP3Q9BWW4 388 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-205ENST00000488072 SHISA3A0PJX4 238 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 MEX3AA1L020 520 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 GPX5O75715 221 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 ALX3O95076 343 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 PRDX2P32119 198 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 DVL1P1P54792 670 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 ESCO2Q56NI9 601 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 GLCCI1Q86VQ1 547 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 SVOPQ8N4V2 548 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 GPER1Q99527 375 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 GFI1Q99684 422 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 TMPRSS13Q9BYE2 586 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 FAM192AQ9GZU8 254 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 CLN8Q9UBY8 286 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 KCNS2Q9ULS6 477 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 POLDIP2Q9Y2S7 368 aa14.22□□□□□ -0.13
SHROOM1-205ENST00000488072 TMEM82A0PJX8 343 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 A8MXK9 166 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 MRPS14O60783 128 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 FOXH1O75593 365 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 KDM4BO94953 1096 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 ACAA1P09110 424 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 PRKACAP17612 351 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 FSTP19883 344 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 DLX1P56177 255 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 PPP3R1P63098 170 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 GPR50Q13585 617 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 FAM120AOSQ5T036 256 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 ATPAF1Q5TC12 328 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 LYPD6Q86Y78 171 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 MS4A15Q8N5U1 240 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 MUL1Q969V5 352 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 DACT3Q96B18 629 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 KCNK15Q9H427 330 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 TMEM138Q9NPI0 162 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 OPN4Q9UHM6 478 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 ING4Q9UNL4 249 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 LRCH1Q9Y2L9 728 aa14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHROOM1-205ENST00000488072 HIVEP2P31629 2446 aa14.21□□□□□ -0.14
SHROOM1-205ENST00000488072 LOC105371242A0A075B767 164 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 SIGLEC5O15389 551 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 RGS9O75916 674 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 ALDOBP05062 364 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 UCHL1P09936 223 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 ZNF93P35789 620 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 COL10A1Q03692 680 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 SMIM21Q3B7S5 101 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 BTN2A1Q7KYR7 527 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 NLRC3Q7RTR2 1065 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 MKXQ8IYA7 352 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 FAM58AQ8N1B3 248 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 TMEM185AQ8NFB2 350 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 OR4D6Q8NGJ1 314 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 C12orf43Q96C57 262 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 NR1H4Q96RI1 486 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 CNTD2Q9H8S5 307 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 RASL12Q9NYN1 266 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 KAAG1Q9UBP8 84 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 FOXJ3Q9UPW0 622 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 GSTK1Q9Y2Q3 226 aa14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 SOX21Q9Y651 276 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-205ENST00000488072 IGHV3OR16-10A0A075B7F0 116 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 TRAV20A0A0B4J274 112 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 KCNJ8Q15842 424 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 HSD17B12Q53GQ0 312 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 TSPAN14Q8NG11 270 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 SDSLQ96GA7 329 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 NUDT16L1Q9BRJ7 211 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 OR51E2Q9H255 320 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 RNF167Q9H6Y7 350 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 HMG20AQ9NP66 347 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 NDUFB11Q9NX14 153 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 AK6Q9Y3D8 172 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 INSIG2Q9Y5U4 225 aa14.19□□□□□ -0.14
SHROOM1-205ENST00000488072 IGHV2-70DA0A0C4DH43 119 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 SMIM30A4D0T7 59 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 NKX6-3A6NJ46 265 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 SIRPB1O00241 398 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 MAGEB3O15480 346 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 NDUFB3O43676 98 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 NDUFA2O43678 99 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 HTR3BO95264 441 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 HAND1O96004 215 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 KNG1P01042 644 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 SMIM18P0DKX4 95 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 HOXB4P17483 251 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 NDUFB7P17568 137 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 SRMP19623 302 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 GABRA5P31644 462 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 PTGFRP43088 359 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms