RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 CEACAM16Q2WEN9 425 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 PHLDA2Q53GA4 152 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 DHRS11Q6UWP2 260 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 FBXL14Q8N1E6 418 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 PIGCQ92535 297 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 SAT2Q96F10 170 aaPredicted RBP15.57■□□□□ 0.08
VIM-206ENST00000487938 SAV1Q9H4B6 383 aaPredicted RBP15.57■□□□□ 0.08
VIM-206ENST00000487938 DECR2Q9NUI1 292 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 TUBD1Q9UJT1 453 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 HSF4Q9ULV5 492 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 IGHV3-9P01782 118 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 IL32P24001 234 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 SRD5A2P31213 254 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 ABCA11PQ4W5N1 156 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 SLC22A25Q6T423 547 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 CPT1CQ8TCG5 803 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 BSCL2Q96G97 398 aaPredicted RBP15.57■□□□□ 0.08
VIM-206ENST00000487938 SEC11CQ9BY50 192 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 ST3GAL6Q9Y274 331 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 KCNIP3Q9Y2W7 256 aa15.57■□□□□ 0.08
VIM-206ENST00000487938 OR6C6A6NF89 314 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 H7C2Y5 167 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 CST4P01036 141 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 NFYBP25208 207 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 CAV2P51636 162 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 EIF5AP63241 154 aaKnown RBP15.56■□□□□ 0.08
VIM-206ENST00000487938 FAM3AP98173 230 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 LHFPL2Q6ZUX7 228 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 LYZL2Q7Z4W2 148 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 OSR2Q8N2R0 312 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 OR10D3Q8NH80 312 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 RTN4IP1Q8WWV3 396 aaPredicted RBP15.56■□□□□ 0.08
VIM-206ENST00000487938 ERGIC1Q969X5 290 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 FOXB1Q99853 325 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 WNT5BQ9H1J7 359 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 AMDHD2Q9Y303 409 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 RNASEK-C17orf49H0YIS7 233 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 YKT6O15498 198 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 DIRAS3O95661 229 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 PDGFBP01127 241 aaPredicted RBP15.56■□□□□ 0.08
VIM-206ENST00000487938 CLDN15P56746 228 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 TMEM187Q14656 261 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 CDCP2Q5VXM1 449 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 TMEM268Q5VZI3 342 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 EIF5AL1Q6IS14 154 aaKnown RBP15.56■□□□□ 0.08
VIM-206ENST00000487938 SKA3Q8IX90 412 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 SGCZQ96LD1 299 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 NRIP2Q9BQI9 281 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 OR2H1Q9GZK4 316 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 RCC2Q9P258 522 aaKnown RBP15.56■□□□□ 0.08
VIM-206ENST00000487938 TIMM10BQ9Y5J6 103 aa15.56■□□□□ 0.08
VIM-206ENST00000487938 ZNF587BE7ETH6 402 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 SNAPINO95295 136 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 MBPP02686 304 aaPredicted RBP15.55■□□□□ 0.08
VIM-206ENST00000487938 SULT1A2P50226 295 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 SPAG16Q8N0X2 631 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 OR5L1Q8NGL2 311 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 OR11L1Q8NGX0 322 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 ZNF845Q96IR2 970 aaPredicted RBP15.55■□□□□ 0.08
VIM-206ENST00000487938 NAA60Q9H7X0 242 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 WDFY4Q6ZS81 3184 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 C19orf67A6NJJ6 358 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 TERTO14746 1132 aaKnown RBP15.55■□□□□ 0.08
VIM-206ENST00000487938 PVALBP20472 110 aaPredicted RBP15.55■□□□□ 0.08
VIM-206ENST00000487938 DTYMKP23919 212 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 NOVA1P51513 510 aaKnown RBP15.55■□□□□ 0.08
VIM-206ENST00000487938 PDZK1IP1Q13113 114 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 HFEQ30201 348 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 PLCXD3Q63HM9 321 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 DHRS7BQ6IAN0 325 aaPredicted RBP15.55■□□□□ 0.08
VIM-206ENST00000487938 ASCL4Q6XD76 172 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 ABHD3Q8WU67 409 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 KCNE4Q8WWG9 221 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 BCO1Q9HAY6 547 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 DEPPQ9NTK1 212 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 NDRG3Q9UGV2 375 aa15.55■□□□□ 0.08
VIM-206ENST00000487938 C9JQL5 133 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 XRCC2O43543 280 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 H2AFB1P0C5Y9 115 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 TDGF1P13385 188 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 CD80P33681 288 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 FLI1Q01543 452 aaPredicted RBP15.54■□□□□ 0.08
VIM-206ENST00000487938 TRA2AQ13595 282 aaKnown RBP eCLIP15.54■□□□□ 0.08
VIM-206ENST00000487938 TMEM42Q69YG0 159 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 BTNL8Q6UX41 500 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 Q6ZRG5 221 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 GUCD1Q96NT3 240 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 MLXQ9UH92 298 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 SLC7A11Q9UPY5 501 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 CELSR3Q9NYQ7 3312 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 LRRC3CA6NJW4 275 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 DNPH1O43598 174 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 JTBO76095 146 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 SFTA3P0C7M3 94 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 Q6ZPA2 131 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 PPP1R32Q7Z5V6 425 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 CALHM1Q8IU99 346 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 ESX1Q8N693 406 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 OR2V1Q8NHB1 315 aa15.54■□□□□ 0.08
VIM-206ENST00000487938 GPR35Q9HC97 309 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms