RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 YWHAEP62258 255 aaKnown RBP0.66□□□□□ -2.3
SMC4-219ENST00000487747 PAFAH1B2P68402 229 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 LAMTOR4Q0VGL1 99 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 TOMM34Q15785 309 aaPredicted RBP0.66□□□□□ -2.3
SMC4-219ENST00000487747 CDNFQ49AH0 187 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 TTC32Q5I0X7 151 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 CLEC19AQ6UXS0 136 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 VTCN1Q7Z7D3 282 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 KATNAL2Q8IYT4 538 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 TRAM1L1Q8N609 369 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 COMMD1Q8N668 190 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 CA5BP1Q8WTZ4 195 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 BAALCQ8WXS3 180 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 APOBEC3DQ96AK3 386 aaPredicted RBP0.66□□□□□ -2.3
SMC4-219ENST00000487747 OR2A7Q96R45 310 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 TSGA10Q9BZW7 698 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 ASB7Q9H672 318 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 KIR3DX1Q9H7L2 352 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 TAC3Q9UHF0 121 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 PRO0628Q9UI54 55 aa0.66□□□□□ -2.3
SMC4-219ENST00000487747 RRP15Q9Y3B9 282 aaKnown RBP0.66□□□□□ -2.3
SMC4-219ENST00000487747 LEUTXA8MZ59 168 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 G3V3Q6 166 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 GOLGA8TH3BQL2 631 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 SLC37A4O43826 429 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 HLA-AP01891 365 aaKnown RBP0.65□□□□□ -2.31
SMC4-219ENST00000487747 PTMSP20962 102 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 GALP22466 123 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 HTR2BP41595 481 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 MAGEA1P43355 309 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 MLF1P58340 268 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 RPL10AP62906 217 aaKnown RBP0.65□□□□□ -2.31
SMC4-219ENST00000487747 PMVKQ15126 192 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 ZNF404Q494X3 552 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 SETD3Q86TU7 594 aaPredicted RBP0.65□□□□□ -2.31
SMC4-219ENST00000487747 UBA3Q8TBC4 463 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 OR8D1Q8WZ84 308 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 PYURFQ96I23 114 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 MTG1Q9BT17 334 aaPredicted RBP0.65□□□□□ -2.31
SMC4-219ENST00000487747 MRPL20Q9BYC9 149 aaKnown RBP0.65□□□□□ -2.31
SMC4-219ENST00000487747 VPS37BQ9H9H4 285 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 PXMP2Q9NR77 195 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 AK9Q5TCS8 1911 aa0.65□□□□□ -2.31
SMC4-219ENST00000487747 SHANK3Q9BYB0 1731 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 A0A0B4J2C4 111 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 F5H5P2 479 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 H3BMM0 161 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 CASQ2O14958 399 aaPredicted RBP0.64□□□□□ -2.31
SMC4-219ENST00000487747 HSBP1O75506 76 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 S1PR2O95136 353 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 OPN1SWP03999 348 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 CDK1P06493 297 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 FGF4P08620 206 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 GZMAP12544 262 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ST3GAL4Q11206 333 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 TMEM215Q68D42 235 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ULK3Q6PHR2 472 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 EPGNQ6UW88 154 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 CYHR1Q6ZMK1 362 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 MRPL21Q7Z2W9 205 aaKnown RBP0.64□□□□□ -2.31
SMC4-219ENST00000487747 OR2W3Q7Z3T1 314 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 LYZL2Q7Z4W2 148 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ZNF567Q8N184 647 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 CYP4Z2PQ8N1L4 340 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ZNF738Q8NE65 137 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 OR10D4PQ8NGN7 298 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 OR2K2Q8NGT1 345 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 GPX8Q8TED1 209 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 UBE2WQ96B02 151 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 SMIM8Q96KF7 97 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 C20orf144Q9BQM9 153 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 TMED9Q9BVK6 235 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 RBM22Q9NW64 420 aaKnown RBP eCLIP0.64□□□□□ -2.315e-24■■■■■ 66.5
SMC4-219ENST00000487747 MRPL22Q9NWU5 206 aaKnown RBP0.64□□□□□ -2.31
SMC4-219ENST00000487747 ADA2Q9NZK5 511 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 SLC7A11Q9UPY5 501 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ORC6Q9Y5N6 252 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 INSIG2Q9Y5U4 225 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ZNF780BQ9Y6R6 833 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 U3KQK5 164 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 MPDZO75970 2070 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 ADGRB3O60242 1522 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 NOS1P29475 1434 aa0.64□□□□□ -2.31
SMC4-219ENST00000487747 TRGV4A0A0C4DH28 118 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 K7ERS5 55 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 GYG2O15488 501 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 PTTG1O95997 202 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 OR5AL1P0C617 328 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 ANXA8P13928 327 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 CTLA4P16410 223 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 ZNF22P17026 224 aaPredicted RBP0.63□□□□□ -2.31
SMC4-219ENST00000487747 CNTFRP26992 372 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 GABRR2P28476 465 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 CSKP41240 450 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 RAB11BQ15907 218 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 SSX1Q16384 188 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 CLEC12AQ5QGZ9 265 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 ANXA8L1Q5VT79 327 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 ZNF322Q6U7Q0 402 aaPredicted RBP0.63□□□□□ -2.31
SMC4-219ENST00000487747 SLC35D2Q76EJ3 337 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms