RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 CYGBQ8WWM9 190 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 TAF15Q92804 592 aaKnown RBP eCLIP16.75■□□□□ 0.27
HDAC4-209ENST00000487617 CHIAQ9BZP6 476 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 CAB39Q9Y376 341 aaPredicted RBP16.75■□□□□ 0.27
HDAC4-209ENST00000487617 POMT1Q9Y6A1 747 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 A0A1W2PPH5 198 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 E9PI62 339 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 NPFFO15130 113 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 CLIC3O95833 236 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 CYB5AP00167 134 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 CRYBA1P05813 215 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 GBX2P52951 348 aaPredicted RBP16.74■□□□□ 0.27
HDAC4-209ENST00000487617 ZNF691Q5VV52 312 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 TMEM200BQ69YZ2 307 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 FIP1L1Q6UN15 594 aaKnown RBP16.74■□□□□ 0.27
HDAC4-209ENST00000487617 MKXQ8IYA7 352 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 PNKDQ8N490 385 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 ASCC1Q8N9N2 400 aaKnown RBP16.74■□□□□ 0.27
HDAC4-209ENST00000487617 OR5D13Q8NGL4 314 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 EMG1Q92979 244 aaKnown RBP16.74■□□□□ 0.27
HDAC4-209ENST00000487617 SPSB1Q96BD6 273 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 FAM234AQ9H0X4 552 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 UNKLQ9H9P5 680 aaKnown RBP16.74■□□□□ 0.27
HDAC4-209ENST00000487617 C8orf4Q9NR00 106 aa16.74■□□□□ 0.27
HDAC4-209ENST00000487617 FAM181BA6NEQ2 426 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 TMEM212A6NML5 194 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 CHRM2P08172 466 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 CCDC159P0C7I6 412 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 PEX2P28328 305 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 UBE2E1P51965 193 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 TTC23Q5W5X9 447 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 LDLRAD3Q86YD5 345 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 Q8IYB0 196 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 PACRGLQ8N7B6 248 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 OR13C9Q8NGT0 318 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 OR5AK2Q8NH90 309 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 CNIH3Q8TBE1 160 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 OPALINQ96PE5 141 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 COMMD4Q9H0A8 199 aa16.73■□□□□ 0.27
HDAC4-209ENST00000487617 FGF20Q9NP95 211 aaPredicted RBP16.73■□□□□ 0.27
HDAC4-209ENST00000487617 MEIOCA2RUB1 952 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 K7N7A8 449 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 SPRY1O43609 319 aaPredicted RBP16.72■□□□□ 0.27
HDAC4-209ENST00000487617 ZFPL1O95159 310 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 IGHV4-59P01825 116 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 RPSAP08865 295 aaKnown RBP16.72■□□□□ 0.27
HDAC4-209ENST00000487617 FBP1P09467 338 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 LIMS3P0CW19 117 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 LIMS4P0CW20 117 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 BCL3P20749 454 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 OMGP23515 440 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 NPBWR2P48146 333 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 RFT1Q96AA3 541 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 PDCD1LG2Q9BQ51 273 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 ZNF747Q9BV97 191 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 JAM3Q9BX67 310 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 DPAGT1Q9H3H5 408 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 ZCCHC4Q9H5U6 513 aa16.72■□□□□ 0.27
HDAC4-209ENST00000487617 RBFOX1Q9NWB1 397 aaKnown RBP16.72■□□□□ 0.27
HDAC4-209ENST00000487617 SF3B6Q9Y3B4 125 aaKnown RBP16.72■□□□□ 0.27
HDAC4-209ENST00000487617 ANGPTL7O43827 346 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 PAHP00439 452 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 PIPP12273 146 aaPredicted RBP16.71■□□□□ 0.27
HDAC4-209ENST00000487617 SAA4P35542 130 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 IER3P46695 156 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 PDZK1IP1Q13113 114 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 DHRSXQ8N5I4 330 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 SETD9Q8NE22 299 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 HAVCR2Q8TDQ0 301 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 SPACA5Q96QH8 159 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 NEK6Q9HC98 313 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 IL36RNQ9UBH0 155 aa16.71■□□□□ 0.27
HDAC4-209ENST00000487617 ANK2Q01484 3957 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 TRBV2A0A0J9YWF9 115 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 hCG_1809904A0A1W2PP81 198 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 A0A1W2PPE2 198 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 A0A1W2PR64 198 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 A0A1W2PRV1 198 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 IRGMA1A4Y4 181 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 ANKRD65E5RJM6 399 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 ZNF737O75373 536 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 HAND1O96004 215 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 MT-ND2P03891 347 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 CALCBP10092 127 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 CCL3L1P16619 93 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 MDKP21741 143 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-209ENST00000487617 DCKP27707 260 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 ETV1P50549 477 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 GTF2A1P52655 376 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-209ENST00000487617 EDDM3BP56851 147 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 ACSM1Q08AH1 577 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 ZNF273Q14593 569 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 HCP5Q6MZN7 132 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 GDPD3Q7L5L3 318 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 SERPINA12Q8IW75 414 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 FAM58AQ8N1B3 248 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 OR5D14Q8NGL3 314 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 TSEN15Q8WW01 171 aaKnown RBP16.7■□□□□ 0.26
HDAC4-209ENST00000487617 SNX22Q96L94 193 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 ZNRD1Q9P1U0 126 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms