RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 CLHC1Q8NHS4 586 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 FAM57AQ8TBR7 257 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 YIPF6Q96EC8 236 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 WDR34Q96EX3 536 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 METTL8Q9H825 291 aaKnown RBP3.33□□□□□ -1.88
CUL3-211ENST00000487558 MAT2BQ9NZL9 334 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 STX18Q9P2W9 335 aaKnown RBP3.33□□□□□ -1.88
CUL3-211ENST00000487558 CYB5R1Q9UHQ9 305 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 ELP1O95163 1332 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 PIK3R4Q99570 1358 aa3.33□□□□□ -1.88
CUL3-211ENST00000487558 EIF4G1Q04637 1599 aaKnown RBP3.33□□□□□ -1.88
CUL3-211ENST00000487558 KIR2DS1A0A191URI9 304 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 RNASEK-C17orf49H0YIS7 233 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 OR2A4O95047 310 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 CDK1P06493 297 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 MAGEA3P43357 314 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 CD151P48509 253 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 NUDT2P50583 147 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 XRCC4Q13426 336 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 SLC25A34Q6PIV7 304 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 IGFL3Q6UXB1 125 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 TRMT10CQ7L0Y3 403 aaKnown RBP3.32□□□□□ -1.88
CUL3-211ENST00000487558 SPICQ8N5J4 248 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 MIR7-3HGQ8N6C7 128 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 RNF182Q8N6D2 247 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 OR4K17Q8NGC6 315 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 BLNKQ8WV28 456 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 SERPINB11Q96P15 392 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 DERL3Q96Q80 235 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 OR2A7Q96R45 310 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 CYTH2Q99418 400 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 OR2S2Q9NQN1 319 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 RWDD2AQ9UIY3 292 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 KLF13Q9Y2Y9 288 aaPredicted RBP3.32□□□□□ -1.88
CUL3-211ENST00000487558 USH1CQ9Y6N9 552 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 TMEM94Q12767 1356 aa3.32□□□□□ -1.88
CUL3-211ENST00000487558 LOC389332A0A1B0GUA5 103 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 UBDO15205 165 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 RTL8CO15255 209 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 POLR3GO15318 223 aaPredicted RBP3.31□□□□□ -1.88
CUL3-211ENST00000487558 CDRT1O95170 752 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 TUFMP49411 452 aaKnown RBP3.31□□□□□ -1.88
CUL3-211ENST00000487558 BNIP2Q12982 314 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 TRAM1Q15629 374 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 TRIP13Q15645 432 aaPredicted RBP3.31□□□□□ -1.88
CUL3-211ENST00000487558 BSXQ3C1V8 233 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 CLLU1OSQ5K130 101 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 AHSA2Q719I0 299 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 NT5DC3Q86UY8 548 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 SLC26A10Q8NG04 563 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 UBA3Q8TBC4 463 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 ACBD6Q9BR61 282 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 MS4A8Q9BY19 250 aa3.31□□□□□ -1.88
CUL3-211ENST00000487558 YEATS2Q9ULM3 1422 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 ARID1AO14497 2285 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 CABIN1Q9Y6J0 2220 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 USP42Q9H9J4 1324 aaKnown RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 LGALS9O00182 355 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 CRXO43186 299 aaPredicted RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 NQO2P16083 231 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 GTF2H1P32780 548 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 IDH2P48735 452 aaKnown RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 TTPAP49638 278 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 CCL23P55773 120 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 ELOCQ15369 112 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 SHHQ15465 462 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 OR4D1Q15615 310 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 SP6Q3SY56 376 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 ZNF404Q494X3 552 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 KHDRBS2Q5VWX1 349 aaKnown RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 Q6ZT83 130 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 MRPL52Q86TS9 123 aaKnown RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 ACBD4Q8NC06 268 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 OR5H2Q8NGV7 314 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 ZMYND19Q96E35 227 aaPredicted RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 PITX2Q99697 317 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 ZNF2Q9BSG1 426 aaPredicted RBP3.3□□□□□ -1.88
CUL3-211ENST00000487558 ASB7Q9H672 318 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 IFT46Q9NQC8 304 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 GMEB1Q9Y692 573 aa3.3□□□□□ -1.88
CUL3-211ENST00000487558 NUP214P35658 2090 aaPredicted RBP3.29□□□□□ -1.88
CUL3-211ENST00000487558 COL27A1Q8IZC6 1860 aaPredicted RBP3.29□□□□□ -1.88
CUL3-211ENST00000487558 NRCAMQ92823 1304 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 ZNF98A6NK75 572 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 IQCF5A8MTL0 148 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 MFNGO00587 321 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 SLC37A4O43826 429 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 SEC11BP0C7V7 166 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 ACOT2P49753 483 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 DMTNQ08495 405 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 SSX1Q16384 188 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 LINC00303Q3SY05 128 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 UBE2NLQ5JXB2 153 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 ZNF678Q5SXM1 525 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 FAM104BQ5XKR9 115 aa3.29□□□□□ -1.88
CUL3-211ENST00000487558 CASP12Q6UXS9 341 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms