RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 MTCP1P56278 107 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 RELBQ01201 579 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 COL10A1Q03692 680 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 RAB40BQ12829 278 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 ALKBH1Q13686 389 aaKnown RBP9.36□□□□□ -0.91
SPEN-205ENST00000487496 ZSCAN26Q16670 478 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 HCP5Q6MZN7 132 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 SYS1Q8N2H4 156 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 OR52I1Q8NGK6 324 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 OR5D13Q8NGL4 314 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 DYRK2Q92630 601 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 STMN2Q93045 179 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 DPAGT1Q9H3H5 408 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 INPP5EQ9NRR6 644 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 MRPS18AQ9NVS2 196 aaKnown RBP9.36□□□□□ -0.91
SPEN-205ENST00000487496 SMPD3Q9NY59 655 aaPredicted RBP9.36□□□□□ -0.91
SPEN-205ENST00000487496 C1RLQ9NZP8 487 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.36□□□□□ -0.91
SPEN-205ENST00000487496 ZNRD1Q9P1U0 126 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 SF3B6Q9Y3B4 125 aaKnown RBP9.36□□□□□ -0.91
SPEN-205ENST00000487496 RPL36Q9Y3U8 105 aaKnown RBP9.36□□□□□ -0.91
SPEN-205ENST00000487496 MMP24Q9Y5R2 645 aa9.36□□□□□ -0.91
SPEN-205ENST00000487496 NBEAL1Q6ZS30 2694 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 E9PI62 339 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 GPR137BO60478 399 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 CCL3L1P16619 93 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 PRKACBP22694 351 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 NPBWR2P48146 333 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 POU3F4P49335 361 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 RAG2P55895 527 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 RPL15P61313 204 aaKnown RBP9.35□□□□□ -0.91
SPEN-205ENST00000487496 ACSM1Q08AH1 577 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 ZNF273Q14593 569 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 TAF9Q16594 264 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 SMN1Q16637 294 aaKnown RBP9.35□□□□□ -0.91
SPEN-205ENST00000487496 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 LPCAT4Q643R3 524 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 LHFPL2Q6ZUX7 228 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 MKXQ8IYA7 352 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 ZNF676Q8N7Q3 588 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 ASCC1Q8N9N2 400 aaKnown RBP9.35□□□□□ -0.91
SPEN-205ENST00000487496 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 OR13C3Q8NGS6 347 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 EMG1Q92979 244 aaKnown RBP9.35□□□□□ -0.91
SPEN-205ENST00000487496 SPSB1Q96BD6 273 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 OPALINQ96PE5 141 aa9.35□□□□□ -0.91
SPEN-205ENST00000487496 A0A1B0GUS0 222 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 TMEM82A0PJX8 343 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 ANGPTL7O43827 346 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 WBP4O75554 376 aaKnown RBP9.34□□□□□ -0.91
SPEN-205ENST00000487496 ZFPL1O95159 310 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 NDUFA7O95182 113 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 CYB5AP00167 134 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 PAHP00439 452 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 MT-ND2P03891 347 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 LIMS3P0CW19 117 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 LIMS4P0CW20 117 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 PIPP12273 146 aaPredicted RBP9.34□□□□□ -0.91
SPEN-205ENST00000487496 BCL3P20749 454 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 ERVFRD-1P60508 538 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 MRPL28Q13084 256 aaKnown RBP9.34□□□□□ -0.91
SPEN-205ENST00000487496 PDZK1IP1Q13113 114 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 LRRC36Q1X8D7 754 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 MIDNQ504T8 468 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 RNF144BQ7Z419 303 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 Q8IYB0 196 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 OR8H2Q8N162 312 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 FAM58AQ8N1B3 248 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 OR13C9Q8NGT0 318 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 OR4F5Q8NH21 305 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 SLITRK2Q9H156 845 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 SEBOXQ9HB31 216 aaPredicted RBP9.34□□□□□ -0.91
SPEN-205ENST00000487496 BEX1Q9HBH7 125 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 RBFOX1Q9NWB1 397 aaKnown RBP9.34□□□□□ -0.91
SPEN-205ENST00000487496 IL36RNQ9UBH0 155 aa9.34□□□□□ -0.91
SPEN-205ENST00000487496 IGKV1-12A0A0C4DH73 117 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 TRBV2A0A0J9YWF9 115 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 hCG_1809904A0A1W2PP81 198 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 A0A1W2PPE2 198 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 A0A1W2PR64 198 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 A0A1W2PRV1 198 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 BTBD17A6NE02 478 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 TMEM212A6NML5 194 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 C17orf98A8MV24 154 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 SPRY1O43609 319 aaPredicted RBP9.33□□□□□ -0.92
SPEN-205ENST00000487496 CLIC3O95833 236 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 HAND1O96004 215 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 IGKV1D-12P01611 117 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 RPSAP08865 295 aaKnown RBP9.33□□□□□ -0.92
SPEN-205ENST00000487496 CCDC159P0C7I6 412 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 OCM2P0CE71 109 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 OCMP0CE72 109 aaPredicted RBP9.33□□□□□ -0.92
SPEN-205ENST00000487496 CALCBP10092 127 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 DUSP1P28562 367 aa9.33□□□□□ -0.92
SPEN-205ENST00000487496 GBX2P52951 348 aaPredicted RBP9.33□□□□□ -0.92
SPEN-205ENST00000487496 DLX6P56179 175 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms