RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CD80P33681 288 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 EFNB2P52799 333 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 ATP5J2P56134 94 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 RBM11P57052 281 aaKnown RBP8.03□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF146Q15072 292 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 SMIM21Q3B7S5 101 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 C2orf76Q3KRA6 126 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF404Q494X3 552 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 FAM201AQ5SY85 155 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 DNM1P46Q6ZS02 220 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 BIVMQ86UB2 503 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 FAM90A1Q86YD7 464 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 FAM58AQ8N1B3 248 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 OSR2Q8N2R0 312 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF525Q8N782 197 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 OR5H6Q8NGV6 325 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 KCNG3Q8TAE7 436 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
MCF2L-227ENST00000486806 FAM46BQ96A09 425 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 SEH1LQ96EE3 360 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 MRPS24Q96EL2 167 aaKnown RBP8.03□□□□□ -1.12
MCF2L-227ENST00000486806 PERPQ96FX8 193 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 Q96M66 194 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 S100A13Q99584 98 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 TM2D1Q9BX74 207 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 TMEM59Q9BXS4 323 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 LPAR5Q9H1C0 372 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 ELL3Q9HB65 397 aaPredicted RBP8.03□□□□□ -1.12
MCF2L-227ENST00000486806 ING4Q9UNL4 249 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 A3GALT2U3KPV4 340 aa8.03□□□□□ -1.12
MCF2L-227ENST00000486806 A0A0A6YYD4 124 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 OOEPA6NGQ2 149 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 FOXI3A8MTJ6 420 aaPredicted RBP8.02□□□□□ -1.13
MCF2L-227ENST00000486806 LGALS8O00214 317 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 HTR3BO95264 441 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 MPIG6BO95866 241 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 KNG1P01042 644 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 CSTBP04080 98 aaKnown RBP8.02□□□□□ -1.13
MCF2L-227ENST00000486806 CSF3P09919 207 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 MUC1P15941 1255 aaPredicted RBP8.02□□□□□ -1.13
MCF2L-227ENST00000486806 PRKACAP17612 351 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 GIFP27352 417 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 TMEM33P57088 247 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 BTG1P62324 171 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 RPS27AP62979 156 aaKnown RBP8.02□□□□□ -1.13
MCF2L-227ENST00000486806 IL13RA2Q14627 380 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 ZMYND11Q15326 602 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 PIGYQ3MUY2 71 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 SPIN3Q5JUX0 258 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 STUMQ69YW2 141 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 LINC00596Q86U02 117 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 C19orf18Q8NEA5 215 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 BANF2Q9H503 90 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 SEBOXQ9HB31 216 aaPredicted RBP8.02□□□□□ -1.13
MCF2L-227ENST00000486806 PCDHB16Q9NRJ7 776 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 RHBDL2Q9NX52 303 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 PTTG2Q9NZH5 202 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 NLKQ9UBE8 527 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 ZNF222Q9UK12 451 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 WIPI2Q9Y4P8 454 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 CACNA1DQ01668 2161 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 APCP25054 2843 aa8.02□□□□□ -1.13
MCF2L-227ENST00000486806 CENPEQ02224 2701 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 IGKV1D-17A0A075B6S4 117 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 PPIAL4EA0A075B759 164 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 IGHV3OR15-7A0A075B7D8 119 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A10PA6NDY2 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A18PA6NE21 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A16PA6NEW6 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A20PA6NIJ5 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A8PA6NJQ4 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A7PA6NKC0 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A22PA8MWA6 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A12PA8MX19 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A5PA8MXJ8 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A23PA8MXZ1 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 PPIAL4DF5H284 164 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 TNFRSF13BO14836 293 aaPredicted RBP8.01□□□□□ -1.13
MCF2L-227ENST00000486806 GEMIN2O14893 280 aaKnown RBP8.01□□□□□ -1.13
MCF2L-227ENST00000486806 SSX4O60224 188 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 ZNF205O95201 554 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A15PP0C7V4 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A13PP0C7W8 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A14PP0C7W9 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM90A24PP0C7X0 464 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 PPIAL4FP0DN26 164 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 PSG2P11465 335 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 CPT2P23786 658 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 PDLIM4P50479 330 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 GMFBP60983 142 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 MICBQ29980 383 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 MPV17LQ2QL34 196 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 UBE2NLQ5JXB2 153 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 SFRP4Q6FHJ7 346 aaPredicted RBP8.01□□□□□ -1.13
MCF2L-227ENST00000486806 MZT2AQ6P582 158 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 KRTAP1-3Q8IUG1 177 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 FAM89BQ8N5H3 189 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 SAMD12Q8N8I0 201 aa8.01□□□□□ -1.13
MCF2L-227ENST00000486806 BOLLQ8N9W6 283 aaKnown RBP8.01□□□□□ -1.13
MCF2L-227ENST00000486806 MCFD2Q8NI22 146 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms