RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 IL24Q13007 206 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 PPP1R1AQ13522 171 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 IL13RA2Q14627 380 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 LGALSLQ3ZCW2 172 aaPredicted RBP10.27□□□□□ -0.76
PKP4-213ENST00000486254 KRTCAP3Q53RY4 240 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 DMRTC1Q5HYR2 192 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 LY6G6FQ5SQ64 297 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 AADACL3Q5VUY0 350 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 SLC25A26Q70HW3 274 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 CMSS1Q9BQ75 279 aaKnown RBP10.27□□□□□ -0.76
PKP4-213ENST00000486254 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.76
PKP4-213ENST00000486254 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 CDH20Q9HBT6 801 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 DKK4Q9UBT3 224 aa10.27□□□□□ -0.76
PKP4-213ENST00000486254 GOSR2O14653 212 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 GEMIN2O14893 280 aaKnown RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 KLK10O43240 276 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 TNFSF13O75888 250 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 CGAP01215 116 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 IGLV1-44P01699 117 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 CSN2P05814 226 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ACAA1P09110 424 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 CCL2P13500 99 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 PER3P56645 1201 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 DAZAP2Q15038 168 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 C3orf36Q3SXR2 165 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 FAM76BQ5HYJ3 339 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ZNF660Q6AZW8 331 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 TMEM65Q6PI78 240 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 C11orf88Q6PI97 169 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 DHRS11Q6UWP2 260 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 Q8IYB0 196 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 GCNT2Q8N0V5 402 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 OR13G1Q8NGZ3 307 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 SULT4A1Q9BR01 284 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 FGF23Q9GZV9 251 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 RIMS4Q9H426 269 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 C5orf66Q9H5L9 145 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 HEXA-AS1Q9H8Q6 139 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ZNF701Q9NV72 531 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 EHFQ9NZC4 300 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 AK3Q9UIJ7 227 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 AMDHD2Q9Y303 409 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 INTS1Q8N201 2190 aaKnown RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 GTF3C1Q12789 2109 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 RFPL4AA6NLU0 287 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 IQCF6A8MYZ5 107 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ZNF732B4DXR9 585 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 RFPL4AL1F8VTS6 287 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 MKRN2OSH3BPM6 223 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 M0R233 179 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ZNF35P13682 527 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 RPA2P15927 270 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 NFYAP23511 347 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 TIMP3P35625 211 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 HAAOP46952 286 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 SEC61A1P61619 476 aaKnown RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 PPP1CBP62140 327 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 HLXQ14774 488 aaPredicted RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 PIGYQ3MUY2 71 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 C3P1Q6ZMU1 363 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 BEND4Q6ZU67 534 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 RBMXL3Q8N7X1 1067 aaKnown RBP10.26□□□□□ -0.77
PKP4-213ENST00000486254 LILRB4Q8NHJ6 448 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 MARCH1Q8TCQ1 289 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ST6GALNAC5Q9BVH7 336 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 RTL8AQ9BWD3 113 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 ZNF286AQ9HBT8 521 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 NECAP2Q9NVZ3 263 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 PROCRQ9UNN8 238 aa10.26□□□□□ -0.77
PKP4-213ENST00000486254 TRBV6-6A0A0A6YYG2 114 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 LRP5LA4QPB2 252 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 TUBAL3A6NHL2 446 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 TMEM210A6NLX4 147 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 TRAPPC2LH3BP13 241 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 J3QT63 122 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 SFT2D2O95562 160 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 CTSDP07339 412 aaPredicted RBP10.25□□□□□ -0.77
PKP4-213ENST00000486254 CALCRP30988 508 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 ZNF81P51508 661 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 GPM6AP51674 278 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 UCP3P55916 312 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 PRSS12P56730 875 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 ARPC4P59998 168 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 CYCSP99999 105 aaKnown RBP10.25□□□□□ -0.77
PKP4-213ENST00000486254 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 TEX261Q6UWH6 196 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 WDR31Q8NA23 367 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 FAAP24Q9BTP7 215 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 CHIAQ9BZP6 476 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 CLEC4MQ9H2X3 399 aaPredicted RBP10.25□□□□□ -0.77
PKP4-213ENST00000486254 RAB18Q9NP72 206 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 ZNF71Q9NQZ8 489 aaPredicted RBP10.25□□□□□ -0.77
PKP4-213ENST00000486254 U3KQ87 197 aa10.25□□□□□ -0.77
PKP4-213ENST00000486254 PTPRZ1P23471 2315 aaPredicted RBP10.25□□□□□ -0.77
PKP4-213ENST00000486254 A0A1B0GWJ7 208 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 MCRIP1C9JLW8 97 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 MSTNO14793 375 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 LYZL6O75951 148 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms