RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CATSPERDQ86XM0 798 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 IFT20Q8IY31 132 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 RNF113BQ8IZP6 322 aaKnown RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 OFCC1Q8IZS5 231 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 ABHD12Q8N2K0 398 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 OR4C15Q8NGM1 316 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 ZNF671Q8TAW3 534 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 ARPC1AQ92747 370 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 NMNAT3Q96T66 252 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 NRIP2Q9BQI9 281 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 THAP7Q9BT49 309 aaPredicted RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 NDEL1Q9GZM8 345 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 FN3KQ9H479 309 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 KRCC1Q9NPI7 259 aaPredicted RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 RPRD1BQ9NQG5 326 aaKnown RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 RHCGQ9UBD6 479 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 BAG5Q9UL15 447 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 TMEM82A0PJX8 343 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 ARRDC5A6NEK1 342 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 CXorf65A6NEN9 183 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 OOSP1A8MZH6 123 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 ZNF732B4DXR9 585 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 BUB1B-PAK6H3BSN5 160 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 HLA-DQA2P01906 255 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 KITP10721 976 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 CFL1P23528 166 aaKnown RBP6.31□□□□□ -1.4
XRN1-212ENST00000486211 CD34P28906 385 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 CX3CR1P49238 355 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 SLURP1P55000 103 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 EDDM3BP56851 147 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 GNG3P63215 75 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 EIF2B1Q14232 305 aaKnown RBP6.31□□□□□ -1.4
XRN1-212ENST00000486211 SNCBQ16143 134 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 VMACQ2NL98 169 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 HLA-DRB5Q30154 266 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 HAGHLQ6PII5 290 aaPredicted RBP6.31□□□□□ -1.4
XRN1-212ENST00000486211 KRT74Q7RTS7 529 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 DCXRQ7Z4W1 244 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 FTMTQ8N4E7 242 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 EIF1ADQ8N9N8 165 aaKnown RBP6.31□□□□□ -1.4
XRN1-212ENST00000486211 OR56B4Q8NH76 319 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 ZNF596Q8TC21 504 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 PIGCQ92535 297 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 SLAMF6Q96DU3 332 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 UBE2E2Q96LR5 201 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 GON7Q9BXV9 100 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 KLK15Q9H2R5 256 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 HES4Q9HCC6 221 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 SNX13Q9Y5W8 968 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 LINC00312Q9Y6C7 94 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 DNAH6Q9C0G6 4158 aa6.31□□□□□ -1.4
XRN1-212ENST00000486211 A0A1W2PPI3 338 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 hADV38S2A0JD32 116 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 FAM172BPA6NC97 362 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 TVP23AA6NH52 213 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 J3KTA2 159 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 PSMD9O00233 223 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 NOS1APO75052 506 aaPredicted RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 IGLV1-51P01701 117 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ANXA2P07355 339 aaKnown RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 OR8U9P0C7N5 309 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 HIST1H1CP16403 213 aaKnown RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 TMEM11P17152 192 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 CEACAM3P40198 252 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 MNDAP41218 407 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 YAP1P46937 504 aaKnown RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 RPS6KA3P51812 740 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ISL1P61371 349 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 TRAM2Q15035 370 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 GFOD2Q3B7J2 385 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 UTF1Q5T230 341 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 PRAMEF5Q5TYX0 476 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 CCDC144NLQ6NUI1 221 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ZNF730Q6ZMV8 503 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 FAM57BQ71RH2 274 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 RTN4RL2Q86UN3 420 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 C17orf53Q8N3J3 647 aaPredicted RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 TPRX1Q8N7U7 411 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ZNF491Q8N8L2 437 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ASCC1Q8N9N2 400 aaKnown RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 OR4K13Q8NH42 304 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 OR10A6Q8NH74 314 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ZNRF4Q8WWF5 429 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ZBTB9Q96C00 473 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 OR5B12Q96R08 314 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 CGREF1Q99674 301 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 NSRP1Q9H0G5 558 aaKnown RBP6.3□□□□□ -1.4
XRN1-212ENST00000486211 ABCG5Q9H222 651 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 GHITMQ9H3K2 345 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ZNF286AQ9HBT8 521 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 CENPMQ9NSP4 180 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 THAP1Q9NVV9 213 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 CCDC167Q9P0B6 97 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 OR14J1Q9UGF5 321 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.3□□□□□ -1.4
XRN1-212ENST00000486211 CEPT1Q9Y6K0 416 aa6.3□□□□□ -1.4
XRN1-212ENST00000486211 ZNF878C9JN71 531 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 SNNO75324 88 aaPredicted RBP6.29□□□□□ -1.4
XRN1-212ENST00000486211 RENP00797 406 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms