RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ALX3O95076 343 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 CYB5R3P00387 301 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-226ENST00000486210 MDKP21741 143 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-226ENST00000486210 GADD45AP24522 165 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 MAPK3P27361 379 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-226ENST00000486210 LRRC28Q86X40 367 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-226ENST00000486210 CALHM1Q8IU99 346 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 OR52N4Q8NGI2 321 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 OR13F1Q8NGS4 319 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 RFT1Q96AA3 541 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 SPSB1Q96BD6 273 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 BORCS8Q96FH0 119 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 FN3KRPQ9HA64 309 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 STUB1Q9UNE7 303 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 FOXJ3Q9UPW0 622 aa14.64□□□□□ -0.07
MCF2L-226ENST00000486210 SHISA3A0PJX4 238 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 RHBDL1O75783 438 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 MAS1P04201 325 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 HCKP08631 526 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 PRKACBP22694 351 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 CPT2P23786 658 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 HAAOP46952 286 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 PPP3R1P63098 170 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 ZMYND11Q15326 602 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 HSD17B12Q53GQ0 312 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 FAM201AQ5SY85 155 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 C22orf42Q6IC83 251 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 HAGHLQ6PII5 290 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-226ENST00000486210 LRRTM1Q86UE6 522 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 DNAAF1Q8NEP3 725 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 Q8TCH9 128 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 THRSPQ92748 146 aa14.63□□□□□ -0.07
MCF2L-226ENST00000486210 EXOSC4Q9NPD3 245 aaKnown RBP14.63□□□□□ -0.07
MCF2L-226ENST00000486210 POLR3KQ9Y2Y1 108 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-226ENST00000486210 LRRC30A6NM36 301 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 A8MXK9 166 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 TMEM178BH3BS89 294 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 SYNGR1O43759 233 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 PLATP00750 562 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 OCMP0CE72 109 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-226ENST00000486210 RPS2P15880 293 aaKnown RBP14.62□□□□□ -0.07
MCF2L-226ENST00000486210 BDKRB2P30411 391 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 RBP2P50120 134 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 ATP1B3P54709 279 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 MTCP1P56278 107 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 SEC61A1P61619 476 aaKnown RBP14.62□□□□□ -0.07
MCF2L-226ENST00000486210 SRSF4Q08170 494 aaKnown RBP14.62□□□□□ -0.07
MCF2L-226ENST00000486210 SLC9A3R2Q15599 337 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 BTNL3Q6UXE8 466 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 WDR82Q6UXN9 313 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 LHFPL2Q6ZUX7 228 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 C1orf87Q8N0U7 546 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 AQP3Q92482 292 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 ERGIC1Q969X5 290 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 CHCHD6Q9BRQ6 235 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 RNF167Q9H6Y7 350 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 TMEM138Q9NPI0 162 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 TXNL4BQ9NX01 149 aaKnown RBP14.62□□□□□ -0.07
MCF2L-226ENST00000486210 CKLFQ9UBR5 152 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 INSIG2Q9Y5U4 225 aa14.62□□□□□ -0.07
MCF2L-226ENST00000486210 SOX21Q9Y651 276 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-226ENST00000486210 hCG_1807616A0A1W2PRN6 198 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 CLDN34H7C241 214 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 J3QT63 122 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 ZNF205O95201 554 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 ALDOBP05062 364 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 IRF2P14316 349 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 SRMP19623 302 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 GALP22466 123 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
MCF2L-226ENST00000486210 KISS1Q15726 138 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 ZNF181Q2M3W8 571 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 DDI2Q5TDH0 399 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 SATL1Q86VE3 508 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 ZNF573Q86YE8 665 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 BATF2Q8N1L9 274 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 GCSAMQ8N6F7 178 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 C19orf18Q8NEA5 215 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 OR5D18Q8NGL1 313 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 LRRC29Q8WV35 223 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 PHYHIPQ92561 330 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 SLC25A28Q96A46 364 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 ZNF488Q96MN9 340 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 GFI1Q99684 422 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 SSBP3Q9BWW4 388 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-226ENST00000486210 MS4A7Q9GZW8 240 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-226ENST00000486210 TCF7L1Q9HCS4 588 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 RNF7Q9UBF6 113 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 SSR3Q9UNL2 185 aa14.61□□□□□ -0.07
MCF2L-226ENST00000486210 LOC100506127A0A0U1RQW1 187 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 CEACAM18A8MTB9 384 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 F5H0A9 414 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-226ENST00000486210 LHBP01229 141 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 OMGP23515 440 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 MPZP25189 248 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 TGFBR1P36897 503 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 POU3F4P49335 361 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 ZP1P60852 638 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 GNB2P62879 340 aa14.6□□□□□ -0.07
MCF2L-226ENST00000486210 NLRC3Q7RTR2 1065 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms