RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PELI1Q96FA3 418 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 C4orf36Q96KX1 117 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 ZNF696Q9H7X3 374 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 IGKV1-9A0A0C4DH69 117 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 CLPSL1A2RUU4 121 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 INMTO95050 263 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 DBTP11182 482 aaKnown RBP15.03■□□□□ -0
PRPF40A-209ENST00000486100 ATF1P18846 271 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 PRKACBP22694 351 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 COL10A1Q03692 680 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 ZNF91Q05481 1191 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 GALEQ14376 348 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 TAF9Q16594 264 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 MIDNQ504T8 468 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 PRR31Q5SQ13 230 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 OLFML2AQ68BL7 652 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 GDPGP1Q6ZNW5 385 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 LHFPL3Q86UP9 236 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 MKXQ8IYA7 352 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 HEXA-AS1Q9H8Q6 139 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 SEBOXQ9HB31 216 aaPredicted RBP15.03■□□□□ -0
PRPF40A-209ENST00000486100 FAM118AQ9NWS6 357 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 HHLA2Q9UM44 414 aa15.03■□□□□ -0
PRPF40A-209ENST00000486100 hCG_1809904A0A1W2PP81 198 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 A0A1W2PPE2 198 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 A0A1W2PR64 198 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 A0A1W2PRV1 198 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 BTBD17A6NE02 478 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 ANGPTL7O43827 346 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 ZNF737O75373 536 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 FADS2O95864 444 aaKnown RBP15.02■□□□□ -0
PRPF40A-209ENST00000486100 ZNF20P17024 532 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 MTCP1P56278 107 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 ALKBH1Q13686 389 aaKnown RBP15.02■□□□□ -0
PRPF40A-209ENST00000486100 Q8IYB0 196 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 SYS1Q8N2H4 156 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 ASCC1Q8N9N2 400 aaKnown RBP15.02■□□□□ -0
PRPF40A-209ENST00000486100 BEND2Q8NDZ0 799 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 ALG8Q9BVK2 526 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 AMBNQ9NP70 447 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 MYRFQ9Y2G1 1151 aa15.02■□□□□ -0
PRPF40A-209ENST00000486100 OR4C45A6NMZ5 311 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 BAG2O95816 211 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 CYB5AP00167 134 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 IGHA1P01876 353 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 CCL3L1P16619 93 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 AZGP1P25311 298 aaKnown RBP15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 RAB40BQ12829 278 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 ZNF273Q14593 569 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 LHFPL2Q6ZUX7 228 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 ZSCAN4Q8NAM6 433 aaPredicted RBP15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 OR5R1Q8NH85 324 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 SPSB1Q96BD6 273 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 SNX22Q96L94 193 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 ZNF649Q9BS31 505 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 INPP5EQ9NRR6 644 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 MRPS18AQ9NVS2 196 aaKnown RBP15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 VPREB3Q9UKI3 123 aa15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 RPL36Q9Y3U8 105 aaKnown RBP15.01□□□□□ -0.01
PRPF40A-209ENST00000486100 ERVFRD-1P60508 538 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 C17orf107Q6ZR85 190 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 ZNF676Q8N7Q3 588 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 OR51A4Q8NGJ6 313 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 OR13C3Q8NGS6 347 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 OR10AC1Q8NH08 325 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 LINC01006Q8NI28 216 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 C17orf50Q8WW18 174 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 WFDC12Q8WWY7 111 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 EMG1Q92979 244 aaKnown RBP15□□□□□ -0.01
PRPF40A-209ENST00000486100 AJUBAQ96IF1 538 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 OPALINQ96PE5 141 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 MEGF9Q9H1U4 602 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 ISG20L2Q9H9L3 353 aaKnown RBP15□□□□□ -0.01
PRPF40A-209ENST00000486100 ERVK13-1Q9NX77 482 aa15□□□□□ -0.01
PRPF40A-209ENST00000486100 TRBV2A0A0J9YWF9 115 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 C17orf98A8MV24 154 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 MT-ND2P03891 347 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 RPSAP08865 295 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 OCM2P0CE71 109 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 OCMP0CE72 109 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 PIPP12273 146 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 NPBWR2P48146 333 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 POU3F4P49335 361 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 DLX6P56179 175 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 MRPL28Q13084 256 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 PDZK1IP1Q13113 114 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 KLHL22Q53GT1 634 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 GDPD3Q7L5L3 318 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 OR8H2Q8N162 312 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 FAM58AQ8N1B3 248 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 OR52I1Q8NGK6 324 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 RDH12Q96NR8 316 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 RBFOX1Q9NWB1 397 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 RNF114Q9Y508 228 aa14.99□□□□□ -0.01
PRPF40A-209ENST00000486100 TMEM82A0PJX8 343 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 HAND1O96004 215 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 ZNF728P0DKX0 622 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 BCL3P20749 454 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 TGFBR2P37173 567 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 EDDM3BP56851 147 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms