RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ZNF488Q96MN9 340 aa10.33□□□□□ -0.76
HMG20B-211ENST00000486028 PALMDQ9NP74 551 aa10.33□□□□□ -0.76
HMG20B-211ENST00000486028 ERGIC3Q9Y282 383 aa10.33□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF281Q9Y2X9 895 aa10.33□□□□□ -0.76
HMG20B-211ENST00000486028 TPRKBQ9Y3C4 175 aa10.33□□□□□ -0.76
HMG20B-211ENST00000486028 SIRT4Q9Y6E7 314 aaPredicted RBP10.33□□□□□ -0.76
HMG20B-211ENST00000486028 SVEP1Q4LDE5 3571 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 IGKV1D-17A0A075B6S4 117 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 RFPL4AA6NLU0 287 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 RFPL4AL1F8VTS6 287 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 SLC1A7O00341 560 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 SIGLEC5O15389 551 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 ALX3O95076 343 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 PLATP00750 562 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 CDK1P06493 297 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 CD2P06729 351 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 PPIAL4GP0DN37 164 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 PRDX2P32119 198 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 TAS2R43P59537 309 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 ERVK11-1P61568 191 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 ARMCX4Q5H9R4 360 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 RNLSQ5VYX0 342 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 NANOGP1Q8N7R0 232 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF485Q8NCK3 441 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 OR13C9Q8NGT0 318 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 GHSRQ92847 366 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 SMIM19Q96E16 107 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 OPALINQ96PE5 141 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 GAFA1Q96PS6 74 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 HES4Q9HCC6 221 aa10.32□□□□□ -0.76
HMG20B-211ENST00000486028 A0A1B0GW55 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 MAGEB3O15480 346 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 SULT1B1O43704 296 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 FCN3O75636 299 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 LALBAP00709 142 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 KNG1P01042 644 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 HNRNPCP07910 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L2P0CJ85 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L3P0CJ86 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L4P0CJ87 422 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L5P0CJ88 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L6P0CJ89 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L7P0CJ90 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 EPHA1P21709 976 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 FPR2P25090 351 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 SOX2P48431 317 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 POU3F4P49335 361 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 WNT4P56705 351 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 FGF12P61328 243 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 PDZK1IP1Q13113 114 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DGUOKQ16854 277 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DMKNQ6E0U4 476 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4L9Q6RFH8 374 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 Q8IYB0 196 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 ZBTB8BQ8NAP8 495 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 TBC1D15Q8TC07 691 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 RGP1Q92546 391 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 SLAMF9Q96A28 289 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 UPRTQ96BW1 309 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 SDSLQ96GA7 329 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 CDCA4Q9BXL8 241 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 CNTD2Q9H8S5 307 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 MTCH1Q9NZJ7 389 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 DUX4Q9UBX2 424 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 SLC25A10Q9UBX3 287 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF222Q9UK12 451 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 NUP50Q9UKX7 468 aa10.31□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF879B4DU55 563 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 H3BMQ9 156 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 FSHBP01225 129 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 TFF1P04155 84 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 HCKP08631 526 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 SELLP14151 372 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 NDUFB7P17568 137 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 RAB3AP20336 220 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 CAPZA1P52907 286 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 TMBIM6P55061 237 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 CAV3P56539 151 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 YIF1BQ5BJH7 314 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
HMG20B-211ENST00000486028 BATF2Q8N1L9 274 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 FGFRL1Q8N441 504 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF561Q8N587 486 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 ZFP41Q8N8Y5 198 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 ZNRF1Q8ND25 227 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 TMEM185AQ8NFB2 350 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 H1FXQ92522 213 aaKnown RBP10.3□□□□□ -0.76
HMG20B-211ENST00000486028 CPNE2Q96FN4 548 aaPredicted RBP10.3□□□□□ -0.76
HMG20B-211ENST00000486028 MND1Q9BWT6 205 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 OR14J1Q9UGF5 321 aa10.3□□□□□ -0.76
HMG20B-211ENST00000486028 A0A0A6YYJ9 748 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 TCF21O43680 179 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 NOL3O60936 208 aaKnown RBP10.29□□□□□ -0.76
HMG20B-211ENST00000486028 TOX4O94842 621 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 INMTO95050 263 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 CD1AP06126 327 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 TMEM225BP0DP42 221 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms