RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 GOLGA6L4A6NEF3 574 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 SC5DO75845 299 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 VAPBO95292 243 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 CXorf1O96002 111 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 TEAD1P28347 426 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 DEKP35659 375 aaKnown RBP1.32□□□□□ -2.2
GCFC2-209ENST00000486016 GPR4P46093 362 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 PRKCDQ05655 676 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF235Q14590 738 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ELOCQ15369 112 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 SYT6Q5T7P8 510 aaPredicted RBP1.32□□□□□ -2.2
GCFC2-209ENST00000486016 FA2HQ7L5A8 372 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 NELFCDQ8IXH7 590 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 CYP4Z2PQ8N1L4 340 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 GAPTQ8N292 157 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 SYS1Q8N2H4 156 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ATPAF2Q8N5M1 289 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ZDHHC22Q8N966 263 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ZFP62Q8NB50 900 aaPredicted RBP1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF555Q8NEP9 628 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 CIDECQ96AQ7 238 aaPredicted RBP1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ADTRPQ96IZ2 230 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 RILPQ96NA2 401 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 PEBP4Q96S96 227 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 SHCBP1LQ9BZQ2 653 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 SYT4Q9H2B2 425 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ASB7Q9H672 318 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 VSIRQ9H7M9 311 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ABCB9Q9NP78 766 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 OR2S2Q9NQN1 319 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF302Q9NR11 478 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 PARP11Q9NR21 331 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 INIPQ9NRY2 104 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 TMEM38BQ9NVV0 291 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 RBM22Q9NW64 420 aaKnown RBP eCLIP1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF492Q9P255 531 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ANXA10Q9UJ72 324 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 ACOT9Q9Y305 439 aa1.32□□□□□ -2.2
GCFC2-209ENST00000486016 SETD1AO15047 1707 aaKnown RBP1.32□□□□□ -2.2
GCFC2-209ENST00000486016 LOXHD1Q8IVV2 1947 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 IGKV2-24A0A0C4DH68 120 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 A0A1W2PNN7 141 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR2AT4A6NND4 320 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 C9JQL5 133 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 E7EWF7 191 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 TCAPO15273 167 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR2A4O95047 310 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 KCNK2O95069 426 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 RLN2P04090 185 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 CDK1P06493 297 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 SNRPAP09012 282 aaKnown RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 INAFM2P0DMQ5 153 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF35P13682 527 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 TAC1P20366 129 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 BGNP21810 368 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 SLC6A1P30531 599 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 NUP62P37198 522 aaPredicted RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 SLC18A1P54219 525 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 BAMBIQ13145 260 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF404Q494X3 552 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 CLLU1OSQ5K130 101 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 IDNKQ5T6J7 187 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ZFAND6Q6FIF0 208 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 FAHD1Q6P587 224 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ADM2Q7Z4H4 148 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR4C13Q8NGP0 309 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR5H2Q8NGV7 314 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR6K2Q8NGY2 324 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR8K3Q8NH51 312 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF75CPQ92670 426 aaPredicted RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 CDKL2Q92772 493 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 RBPMSQ93062 196 aaKnown RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 FXYD5Q96DB9 178 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ZBED3Q96IU2 234 aaPredicted RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 PPP1R36Q96LQ0 422 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 QKIQ96PU8 341 aaKnown RBP eCLIP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR2M4Q96R27 311 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 OR2A7Q96R45 310 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 THTPAQ9BU02 230 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 PRORYQ9H606 182 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 WDR55Q9H6Y2 383 aaPredicted RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 TRIM45Q9H8W5 580 aaPredicted RBP1.31□□□□□ -2.2
GCFC2-209ENST00000486016 VCX3AQ9NNX9 186 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ACOT13Q9NPJ3 140 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 SDHAF2Q9NX18 166 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 VAPAQ9P0L0 249 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF391Q9UJN7 358 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 INSIG2Q9Y5U4 225 aa1.31□□□□□ -2.2
GCFC2-209ENST00000486016 SORL1Q92673 2214 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 LOC389332A0A1B0GUA5 103 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 NDUFS8O00217 210 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 ENSAO43768 121 aaKnown RBP1.3□□□□□ -2.2
GCFC2-209ENST00000486016 KLHL2O95198 593 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 CD8AP01732 235 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 IGHG2P01859 326 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 HTR2BP41595 481 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 FMODQ06828 376 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 GUSBP1Q15486 140 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 VAMP3Q15836 100 aa1.3□□□□□ -2.2
GCFC2-209ENST00000486016 SSX1Q16384 188 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms