RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SSX2Q16385 188 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 ODF4Q2M2E3 257 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 ARSJQ5FYB0 599 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-206ENST00000485790 CRIP3Q6Q6R5 217 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-206ENST00000485790 C1QL4Q86Z23 238 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 C11orf44Q8N8P7 122 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 OR4S1Q8NGB4 309 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 OR11H6Q8NGC7 330 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 TRMT10AQ8TBZ6 339 aaKnown RBP11.15□□□□□ -0.62
SCAF4-206ENST00000485790 PIFOQ8TCI5 191 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 CFHR4Q92496 578 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 SNX22Q96L94 193 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 SEBOXQ9HB31 216 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-206ENST00000485790 MTCH1Q9NZJ7 389 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 FOXJ3Q9UPW0 622 aa11.15□□□□□ -0.62
SCAF4-206ENST00000485790 A0A1W2PQL4 384 aaPredicted RBP11.14□□□□□ -0.63
SCAF4-206ENST00000485790 XPNPEP2O43895 674 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 MITFO75030 526 aaPredicted RBP11.14□□□□□ -0.63
SCAF4-206ENST00000485790 OCM2P0CE71 109 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 OCMP0CE72 109 aaPredicted RBP11.14□□□□□ -0.63
SCAF4-206ENST00000485790 HTR1FP30939 366 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 RBP2P50120 134 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 RAB13P51153 203 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF273Q14593 569 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
SCAF4-206ENST00000485790 C12orf73Q69YU5 71 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 SLC25A26Q70HW3 274 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 FAM220AQ7Z4H9 259 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 KCTD20Q7Z5Y7 419 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 CATSPERDQ86XM0 798 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 OR8H2Q8N162 312 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 BATF2Q8N1L9 274 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 OR10H4Q8NGA5 316 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 OR8J1Q8NGP2 316 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 PP6455Q8WZ26 134 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 SLC7A6OSQ96CW6 309 aaPredicted RBP11.14□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF714Q96N38 554 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 MYCBPQ99417 103 aaPredicted RBP11.14□□□□□ -0.63
SCAF4-206ENST00000485790 TBX5Q99593 518 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 OSBPL10Q9BXB5 764 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 NEK6Q9HC98 313 aa11.14□□□□□ -0.63
SCAF4-206ENST00000485790 FUOMA2VDF0 154 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 FBXO24O75426 580 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 ATP5HO75947 161 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 INMTO95050 263 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 IGHV1-8P0DP01 117 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 PRKACBP22694 351 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 GABRR1P24046 479 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 PAX6P26367 422 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 MTCP1P56278 107 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 IL18R1Q13478 541 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 UBE2V2Q15819 145 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 PLA1AQ53H76 456 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 MINOS1Q5TGZ0 78 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 TMEM244Q5VVB8 128 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 LHFPL4Q7Z7J7 247 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 DNAAF1Q8NEP3 725 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 OR4F17Q8NGA8 305 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 CAPSLQ8WWF8 208 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 TRUB1Q8WWH5 349 aaKnown RBP11.13□□□□□ -0.63
SCAF4-206ENST00000485790 STMN2Q93045 179 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 SLAMF9Q96A28 289 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 OR4F4Q96R69 305 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 CADM1Q9BY67 442 aaKnown RBP11.13□□□□□ -0.63
SCAF4-206ENST00000485790 TCF19Q9Y242 345 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 PCDHGB5Q9Y5G0 923 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
SCAF4-206ENST00000485790 A6NDX4 124 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 F2RL2O00254 374 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 SH2D1BO14796 132 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF737O75373 536 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 UBCP0CG48 685 aaKnown RBP11.12□□□□□ -0.63
SCAF4-206ENST00000485790 EPHA2P29317 976 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 DYNLT3P51808 116 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ARHGDIBP52566 201 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 DLX6P56179 175 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 CDC42P60953 191 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ACTA2P62736 377 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ACTG2P63267 376 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ACTC1P68032 377 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ACTA1P68133 377 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 SLC34A1Q06495 639 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 EDDM3AQ14507 147 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 GRK1Q15835 563 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 FBLN7Q53RD9 439 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 C1orf146Q5VVC0 180 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF626Q68DY1 528 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 OR52W1Q6IF63 320 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF676Q8N7Q3 588 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 NDNFQ8TB73 568 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 EMG1Q92979 244 aaKnown RBP11.12□□□□□ -0.63
SCAF4-206ENST00000485790 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 CHST5Q9GZS9 411 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.12□□□□□ -0.63
SCAF4-206ENST00000485790 GNG8Q9UK08 70 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms