RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 SMURF1Q9HCE7 757 aa12.91□□□□□ -0.34
RPUSD3-217ENST00000485705 EXOSC4Q9NPD3 245 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-217ENST00000485705 TXNL4BQ9NX01 149 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-217ENST00000485705 RASL12Q9NYN1 266 aa12.91□□□□□ -0.34
RPUSD3-217ENST00000485705 MIOXQ9UGB7 285 aa12.91□□□□□ -0.34
RPUSD3-217ENST00000485705 AK6Q9Y3D8 172 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-217ENST00000485705 C2CD3Q4AC94 2353 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 ARL6IP5O75915 188 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 KDM4BO94953 1096 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 LY6G6DO95868 133 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 SELLP14151 372 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 GABRA2P47869 451 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 KCNJ8Q15842 424 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 SMIM21Q3B7S5 101 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 SAXO1Q8IYX7 474 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 FGFRL1Q8N441 504 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 FAM216BQ8N7L0 139 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 PXT1Q8NFP0 134 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 C12orf43Q96C57 262 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 NEIL1Q96FI4 390 aaPredicted RBP12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 CHCHD6Q9BRQ6 235 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 RNF167Q9H6Y7 350 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 ZNF222Q9UK12 451 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 ING4Q9UNL4 249 aa12.9□□□□□ -0.34
RPUSD3-217ENST00000485705 MEGF11A6BM72 1044 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 TMPRSS2O15393 492 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 PHF1O43189 567 aaPredicted RBP12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 GALP22466 123 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 DUSP1P28562 367 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 GZMKP49863 264 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 ASCL4Q6XD76 172 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 ZNF788Q6ZQV5 615 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 FAM58AQ8N1B3 248 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 NKAIN3Q8N8D7 197 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 OR8B3Q8NGG8 313 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 CPNE2Q96FN4 548 aaPredicted RBP12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 OR8B2Q96RD0 313 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 OR14J1Q9UGF5 321 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 SSR3Q9UNL2 185 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 HIVEP2P31629 2446 aa12.89□□□□□ -0.35
RPUSD3-217ENST00000485705 LOC100506127A0A0U1RQW1 187 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 KIAA1324LA8MWY0 1029 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 NDUFA2O43678 99 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 KNG1P01042 644 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 TFAP2AP05549 437 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 HEXAP06865 529 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 CD37P11049 281 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 PRKACAP17612 351 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 FGF9P31371 208 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 PRDX2P32119 198 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 PITPNBP48739 271 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 LCN2P80188 198 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 Q8IYB0 196 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 LINC01356Q8N9X3 169 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 PNLDC1Q8NA58 520 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 CENPOQ9BU64 300 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 HMG20AQ9NP66 347 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 MRPS28Q9Y2Q9 187 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 MAB21L2Q9Y586 359 aa12.88□□□□□ -0.35
RPUSD3-217ENST00000485705 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 TRAV1-2A0A0B4J238 106 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 A0A1W2PP11 408 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 DVL1O14640 695 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 HTR3BO95264 441 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 ALDH3B2P48448 385 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 OR10A3P58181 314 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 IKZF1Q13422 519 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 RSU1Q15404 277 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 DGUOKQ16854 277 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 SLC22A6Q4U2R8 563 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 ESCO2Q56NI9 601 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 C1orf100Q5SVJ3 147 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 GLT8D1Q68CQ7 371 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 AWAT2Q6E213 333 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 GLIPR1L1Q6UWM5 242 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 NLRC3Q7RTR2 1065 aa12.87□□□□□ -0.35
RPUSD3-217ENST00000485705 SLC36A1Q7Z2H8 476 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms