RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 EFNB1P98172 346 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 CNN3Q15417 329 aaKnown RBP10.51□□□□□ -0.73
HDAC6-227ENST00000485102 SMIM21Q3B7S5 101 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 TMEM236Q5W0B7 351 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 KCTD18Q6PI47 426 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-227ENST00000485102 CCBE1Q6UXH8 406 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-227ENST00000485102 CD177Q8N6Q3 437 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 POC1AQ8NBT0 407 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 ASB17Q8WXJ9 295 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 FOXRED1Q96CU9 486 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-227ENST00000485102 TEAD3Q99594 435 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 YIPF3Q9GZM5 350 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 PRSS22Q9GZN4 317 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 OR51V1Q9H2C8 321 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 MED20Q9H944 212 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-227ENST00000485102 C17orf98A8MV24 154 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 ODF3BA8MYP8 253 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 E9PQ18 207 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 SLC1A7O00341 560 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 PRKYO43930 277 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 RPSAP08865 295 aaKnown RBP10.5□□□□□ -0.73
HDAC6-227ENST00000485102 PAX6P26367 422 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 PRDX2P32119 198 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 DLX6P56179 175 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 RIPPLY1Q0D2K3 151 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 KLHL22Q53GT1 634 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 VAX1Q5SQQ9 334 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 AADACL4Q5VUY2 407 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF691Q5VV52 312 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 FOXB2Q5VYV0 432 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 OR11H6Q8NGC7 330 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 OR2T27Q8NH04 317 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 RHOXF1Q8NHV9 184 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 RPS4Y2Q8TD47 263 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 THEM6Q8WUY1 208 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 TFAP2CQ92754 450 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 MBOAT4Q96T53 435 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 CNN2Q99439 309 aaKnown RBP10.5□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF184Q99676 751 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-227ENST00000485102 CITED2Q99967 270 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-227ENST00000485102 INPP5EQ9NRR6 644 aa10.5□□□□□ -0.73
HDAC6-227ENST00000485102 TENM3Q9P273 2699 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 FADS2O95864 444 aaKnown RBP10.49□□□□□ -0.73
HDAC6-227ENST00000485102 PGA5P0DJD9 388 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 CAPZA1P52907 286 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 ADARB1P78563 741 aaKnown RBP10.49□□□□□ -0.73
HDAC6-227ENST00000485102 CD83Q01151 205 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 RAB40BQ12829 278 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 APOFQ13790 326 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 HABP2Q14520 560 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-227ENST00000485102 CEP78Q5JTW2 689 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF626Q68DY1 528 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 HAGHLQ6PII5 290 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-227ENST00000485102 LHFPL4Q7Z7J7 247 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 LYG1Q8N1E2 194 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 DYNAPQ8N1N2 210 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 NKX3-1Q99801 234 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-227ENST00000485102 HES4Q9HCC6 221 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 FAM206AQ9NX38 181 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 LAMP5Q9UJQ1 280 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 BLOC1S6Q9UL45 172 aa10.49□□□□□ -0.73
HDAC6-227ENST00000485102 K7N7A8 449 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 SELENOFO60613 162 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF254O75437 659 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 TK1P04183 234 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 ALDOBP05062 364 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 OR2T7P0C7T2 308 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 CCL3L1P16619 93 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 SLC2A5P22732 501 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 COX7A1P24310 79 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 MPZP25189 248 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 EPHA2P29317 976 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 POLR2IP36954 125 aaKnown RBP10.48□□□□□ -0.73
HDAC6-227ENST00000485102 CXCR4P61073 352 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 MRPL28Q13084 256 aaKnown RBP10.48□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF273Q14593 569 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 IZUMO2Q6UXV1 221 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 KCTD20Q7Z5Y7 419 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF573Q86YE8 665 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 OR13D1Q8NGV5 346 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 OR8B4Q96RC9 309 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 NRIP2Q9BQI9 281 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 MROQ9BYG7 248 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 CHCHD3Q9NX63 227 aaKnown RBP10.48□□□□□ -0.73
HDAC6-227ENST00000485102 SCN3BQ9NY72 215 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 POLDIP2Q9Y2S7 368 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 KLHDC2Q9Y2U9 406 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 DNAH9Q9NYC9 4486 aa10.48□□□□□ -0.73
HDAC6-227ENST00000485102 COL7A1Q02388 2944 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 TMEM269A0A1B0GVZ9 245 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 FAM90A22PA8MWA6 464 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF670-ZNF695F2Z2N8 137 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 J3QT63 122 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 DLGAP1O14490 977 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 NRASP01111 189 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF728P0DKX0 622 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms