RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SERPINA12Q8IW75 414 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 PDZD9Q8IXQ8 264 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 FAM185AQ8N0U4 392 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 GPR148Q8TDV2 347 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 SGCDQ92629 289 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 SMIM19Q96E16 107 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 NKX3-1Q99801 234 aaPredicted RBP13.4□□□□□ -0.26
DDR1-246ENST00000485023 DCTN5Q9BTE1 182 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 SIRPDQ9H106 197 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 RBFOX1Q9NWB1 397 aaKnown RBP13.4□□□□□ -0.26
DDR1-246ENST00000485023 OGG1O15527 345 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 SULT1B1O43704 296 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 CYB5AP00167 134 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 KNG1P01042 644 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 LIPFP07098 398 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 MMP9P14780 707 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 DLX1P56177 255 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 PHC2Q8IXK0 858 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 SIGLECL1Q8N7X8 197 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 ASCC1Q8N9N2 400 aaKnown RBP13.39□□□□□ -0.27
DDR1-246ENST00000485023 OR51A2Q8NGJ7 313 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 RPS4Y2Q8TD47 263 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 TMEM158Q8WZ71 300 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 GHSRQ92847 366 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 LHX4Q969G2 390 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 ORAI1Q96D31 301 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 CNTD2Q9H8S5 307 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 SIRT7Q9NRC8 400 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 FKBP14Q9NWM8 211 aa13.39□□□□□ -0.27
DDR1-246ENST00000485023 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 MDFIC2A0A1B0GVS7 189 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 GPR37O15354 613 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 CDK1P06493 297 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 PRKACAP17612 351 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 MYF6P23409 242 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 DUSP1P28562 367 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 COL10A1Q03692 680 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 PDZK1IP1Q13113 114 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 GPR157Q5UAW9 335 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 DMKNQ6E0U4 476 aaPredicted RBP13.38□□□□□ -0.27
DDR1-246ENST00000485023 ASPHD2Q6ICH7 369 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 VMO1Q7Z5L0 202 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 MKXQ8IYA7 352 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 PARP16Q8N5Y8 322 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 ZNF485Q8NCK3 441 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 LY6G5BQ8NDX9 201 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 OR5D14Q8NGL3 314 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 TMEM106AQ96A25 262 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 CNBD2Q96M20 576 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 ZNF48Q96MX3 618 aaPredicted RBP13.38□□□□□ -0.27
DDR1-246ENST00000485023 DUX5Q96PT3 197 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 C19orf12Q9NSK7 152 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 PAK1IP1Q9NWT1 392 aaPredicted RBP13.38□□□□□ -0.27
DDR1-246ENST00000485023 SCN3BQ9NY72 215 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 ZNF281Q9Y2X9 895 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 ATRQ13535 2644 aa13.38□□□□□ -0.27
DDR1-246ENST00000485023 IGKV1-12A0A0C4DH73 117 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 MEX3AA1L020 520 aaKnown RBP13.37□□□□□ -0.27
DDR1-246ENST00000485023 IGKV1D-12P01611 117 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 CD2P06729 351 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 RAB3AP20336 220 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 CAV3P56539 151 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 WNT4P56705 351 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 HILS1P60008 231 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 KISS1Q15726 138 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 CRIP3Q6Q6R5 217 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 RBMS3Q6XE24 437 aaKnown RBP13.37□□□□□ -0.27
DDR1-246ENST00000485023 SATL1Q86VE3 508 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 ZNF561Q8N587 486 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 OR4M1Q8NGD0 313 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 C19orf24Q9BVV8 132 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 ANKRD60Q9BZ19 345 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 ERGIC3Q9Y282 383 aa13.37□□□□□ -0.27
DDR1-246ENST00000485023 CENPVL3A0A0U1RRI6 287 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 A0A1W2PPK0 400 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 HAND1O96004 215 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 MT-ND2P03891 347 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 TMEM225BP0DP42 221 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 CELP19835 753 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 KLRD1Q13241 179 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 C11orf91Q3C1V1 193 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 FIP1L1Q6UN15 594 aaKnown RBP13.36□□□□□ -0.27
DDR1-246ENST00000485023 CMTM4Q8IZR5 234 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 FAM58AQ8N1B3 248 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 NANOGP1Q8N7R0 232 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.36□□□□□ -0.27
DDR1-246ENST00000485023 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 PGLYRP3Q96LB9 341 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 GPER1Q99527 375 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 ESM1Q9NQ30 184 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 KPTNQ9Y664 436 aa13.36□□□□□ -0.27
DDR1-246ENST00000485023 A0A1W2PRD5 423 aa13.35□□□□□ -0.27
DDR1-246ENST00000485023 A0A1W2PRF3 423 aa13.35□□□□□ -0.27
DDR1-246ENST00000485023 A0A1W2PRM7 423 aa13.35□□□□□ -0.27
DDR1-246ENST00000485023 SIRPB1O00241 398 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms