RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ZCCHC24Q8N2G6 241 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 EMG1Q92979 244 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 ERGIC1Q969X5 290 aa17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 ABHD1Q96SE0 405 aa17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 CCDC32Q9BV29 185 aa17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 EGLN1Q9GZT9 426 aa17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 DECR2Q9NUI1 292 aa17.29■□□□□ 0.36
VCPKMT-203ENST00000484763 TRAV18A0A075B6X5 111 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 A1L4Q6 167 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 FAM221AA4D161 298 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 PRKACAP17612 351 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 GABRR1P24046 479 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 PPOXP50336 477 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 CCL8P80075 99 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 SNX29P2Q8IUI4 249 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 FAM58AQ8N1B3 248 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 OR10Z1Q8NGY1 313 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 POM121Q96HA1 1249 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 SDHCQ99643 169 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 SAP30LQ9HAJ7 183 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 RAI1Q7Z5J4 1906 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 SOCS1O15524 211 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 TPD52L2O43399 206 aaKnown RBP17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 NXPH2O95156 264 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 HLA-DQB1P01920 261 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 DCTN2Q13561 401 aaKnown RBP17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 TAF9Q16594 264 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 Q8N402 240 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 CHST4Q8NCG5 386 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 GCM1Q9NP62 436 aa17.28■□□□□ 0.36
VCPKMT-203ENST00000484763 GEMIN2O14893 280 aaKnown RBP17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 CTDSPLO15194 276 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 DANCRP0C864 163 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 CFHR2P36980 270 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 DTX2Q86UW9 622 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 LRRC29Q8WV35 223 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 ZFAND2BQ8WV99 257 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 RAB3CQ96E17 227 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 UBTD1Q9HAC8 227 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 HES4Q9HCC6 221 aa17.27■□□□□ 0.36
VCPKMT-203ENST00000484763 FAM90A10PA6NDY2 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A18PA6NE21 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A16PA6NEW6 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A20PA6NIJ5 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A8PA6NJQ4 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A7PA6NKC0 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FOXI3A8MTJ6 420 aaPredicted RBP17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A22PA8MWA6 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A12PA8MX19 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A5PA8MXJ8 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A23PA8MXZ1 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A15PP0C7V4 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A13PP0C7W8 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A14PP0C7W9 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A24PP0C7X0 464 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 COX6B1P14854 86 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 BLVRBP30043 206 aaPredicted RBP17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 SNU13P55769 128 aaKnown RBP17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 C11orf71Q6IPW1 123 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 C16orf87Q6PH81 154 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 LINC00596Q86U02 117 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 Q8TCH9 128 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 IL36RNQ9UBH0 155 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 PPP1R3CQ9UQK1 317 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 SOD3P08294 240 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 GLRA1P23415 457 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 MRPS10P82664 201 aaKnown RBP17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 IL13RA2Q14627 380 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 FIP1L1Q6UN15 594 aaKnown RBP17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 OR11L1Q8NGX0 322 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 AUNIPQ9H7T9 357 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 PALMDQ9NP74 551 aa17.26■□□□□ 0.35
VCPKMT-203ENST00000484763 CD8AP01732 235 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 HIST1H1DP16402 221 aaKnown RBP17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 PMELP40967 661 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 TMEM50BP56557 158 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 GMFBP60983 142 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 TLE4Q04727 773 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 MPV17LQ2QL34 196 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 ZNF260Q3ZCT1 412 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 PLAC9Q5JTB6 97 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 Q6ZTK2 550 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 OR8H2Q8N162 312 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 ARHGAP5-AS1Q96IT6 56 aa17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 VRK1Q99986 396 aaPredicted RBP17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 TRAF4Q9BUZ4 470 aaPredicted RBP17.25■□□□□ 0.35
VCPKMT-203ENST00000484763 SRRM5B3KS81 715 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 UPK1BO75841 260 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 OR7C1O76099 320 aaPredicted RBP17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 PTHLHP12272 177 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 GNB3P16520 340 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 ARL6IP1Q15041 203 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 SMIM21Q3B7S5 101 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 CDNFQ49AH0 187 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 SPIN3Q5JUX0 258 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 SP5Q6BEB4 398 aaPredicted RBP17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 SIGIRRQ6IA17 410 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 SMIM4Q8WVI0 70 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 HPS1Q92902 700 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 GCDHQ92947 438 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms