RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CALHM1Q8IU99 346 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 ENTHD1Q8IYW4 607 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 YIPF7Q8N8F6 280 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 POC1AQ8NBT0 407 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 C19orf18Q8NEA5 215 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 HPSE2Q8WWQ2 592 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 PP6455Q8WZ26 134 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 AQP3Q92482 292 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 H1FXQ92522 213 aaKnown RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 RPL3LQ92901 407 aaKnown RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 SDSLQ96GA7 329 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 LYZL4Q96KX0 146 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 Q96MT0 163 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 C8orf49Q96NF6 230 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 TBX15Q96SF7 602 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 CIB1Q99828 191 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 PKIBQ9C010 78 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 HEXA-AS1Q9H8Q6 139 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 SEBOXQ9HB31 216 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 RHOFQ9HBH0 211 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 ADGRL4Q9HBW9 690 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 RAB18Q9NP72 206 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 GLS2Q9UI32 602 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 GTF2A1LQ9UNN4 478 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 SLC22A13Q9Y226 551 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 KLHDC2Q9Y2U9 406 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 V9GYS6 101 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 YLPM1P49750 1951 aaKnown RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 IGHV3OR15-7A0A075B7D8 119 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 IGHV3OR16-10A0A075B7F0 116 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PQLC2LA1A4F0 135 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 H0YAE9 185 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 SYT7O43581 403 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 NXPH2O95156 264 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 RBP4P02753 201 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 TTRP02766 147 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 SFTPBP07988 381 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 MELTFP08582 738 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PGA5P0DJD9 388 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PSG2P11465 335 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 EGR1P18146 543 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 CCL1P22362 96 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PRKACBP22694 351 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 MPZP25189 248 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PRDX2P32119 198 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 TGFBR2P37173 567 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 RPS19P39019 145 aaKnown RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 IER3P46695 156 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 HAAOP46952 286 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ALDH3A2P51648 485 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 CAPZA1P52907 286 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 SNRPGP62308 76 aaKnown RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ACTA2P62736 377 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 RPL31P62899 125 aaKnown RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ACTG2P63267 376 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 IL24Q13007 206 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 CNN3Q15417 329 aaKnown RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 CEP78Q5JTW2 689 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 TMEM244Q5VVB8 128 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 BRD3OSQ6XYD6 125 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ACP7Q6ZNF0 438 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 VMO1Q7Z5L0 202 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 AMIGO2Q86SJ2 522 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 FAM216BQ8N7L0 139 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ZSCAN4Q8NAM6 433 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 DNAAF1Q8NEP3 725 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 TMEM185AQ8NFB2 350 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 OR10H4Q8NGA5 316 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 OR51G2Q8NGK0 314 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PPP1R35Q8TAP8 253 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 LHX4Q969G2 390 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 SPSB1Q96BD6 273 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 CPNE2Q96FN4 548 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 C1orf147Q96MC9 270 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF48Q96MX3 618 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 GAFA1Q96PS6 74 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 NRIP2Q9BQI9 281 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 CDCA4Q9BXL8 241 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 WDR13Q9H1Z4 485 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 RIBC2Q9H4K1 309 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 INPP5EQ9NRR6 644 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 USE1Q9NZ43 259 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 MRM2Q9UI43 246 aaKnown RBP5.06□□□□□ -1.6
PTCD3-215ENST00000484203 PCDHGB5Q9Y5G0 923 aa5.06□□□□□ -1.6
PTCD3-215ENST00000484203 IGKV1D-17A0A075B6S4 117 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 A0A1W2PQL4 384 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-215ENST00000484203 A0A1W2PRX2 142 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 CLPSL1A2RUU4 121 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 FUOMA2VDF0 154 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 RFPL4AA6NLU0 287 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 RFPL4AL1F8VTS6 287 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 M0QZ24 198 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 PSMD9O00233 223 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 EBAG9O00559 213 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 TIMM23O14925 209 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 NPFFO15130 113 aa5.05□□□□□ -1.6
PTCD3-215ENST00000484203 MITFO75030 526 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-215ENST00000484203 SRSF10O75494 262 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms