RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PAPOLBQ9NRJ5 636 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-205ENST00000483847 GPR173Q9NS66 373 aa8.56□□□□□ -1.04
SMARCC1-205ENST00000483847 ZNF256Q9Y2P7 627 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-205ENST00000483847 POLDIP2Q9Y2S7 368 aa8.56□□□□□ -1.04
SMARCC1-205ENST00000483847 LINC00312Q9Y6C7 94 aa8.56□□□□□ -1.04
SMARCC1-205ENST00000483847 hADV38S2A0JD32 116 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 SEC14L6B5MCN3 397 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 IFNGP01579 166 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 IGLV1-47P01700 117 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 IGLV3-1P01715 115 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 IGHA1P01876 353 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 FABP3P05413 133 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 ZNF3P17036 446 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 MPZP25189 248 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 GDNFP39905 211 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 HCCSP53701 268 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 PSME3P61289 254 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 BDH1Q02338 343 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 PPP1R8Q12972 351 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 UTF1Q5T230 341 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 PRAMEF5Q5TYX0 476 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 ZBTB49Q6ZSB9 765 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 ASRGL1Q7L266 308 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 ABHD12Q8N2K0 398 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 IQCF1Q8N6M8 205 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 OR2T33Q8NG76 320 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 OR5M8Q8NGP6 311 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 CHPT1Q8WUD6 406 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 TEAD3Q99594 435 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 CHST6Q9GZX3 395 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 OR51V1Q9H2C8 321 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 ZNF286AQ9HBT8 521 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 CMC2Q9NRP2 79 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 FGFR1OP2Q9NVK5 253 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 FAM206AQ9NX38 181 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 IL36RNQ9UBH0 155 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 ENPP5Q9UJA9 477 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 BAIAP2Q9UQB8 552 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 MOB4Q9Y3A3 225 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 LYVE1Q9Y5Y7 322 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 SMAD5-AS1Q9Y6J3 95 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 HSPE1-MOB4S4R3N1 261 aa8.55□□□□□ -1.04
SMARCC1-205ENST00000483847 TMEM269A0A1B0GVZ9 245 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 A6NIN4 97 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 LINC01548A6NM66 108 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 SERPINE3A8MV23 424 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 LEUTXA8MZ59 168 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 M0QZK8 103 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 GSC2O15499 205 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 INMTO95050 263 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 ATP6V1B1P15313 513 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 HMGA2P52926 109 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 SAMD4BQ5PRF9 694 aaKnown RBP8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 TPTE2P1Q5T6R2 138 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 TMEM42Q69YG0 159 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 HACD2Q6Y1H2 254 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 AQP11Q8NBQ7 271 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 SNX22Q96L94 193 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 CITED4Q96RK1 184 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 PBOV1Q9GZY1 135 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 DCLRE1BQ9H816 532 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 GORASP2Q9H8Y8 452 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 EFCAB1Q9HAE3 211 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 MTCH1Q9NZJ7 389 aa8.54□□□□□ -1.04
SMARCC1-205ENST00000483847 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 ARRDC5A6NEK1 342 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 PRR32B1ATL7 298 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 LY6LH3BQJ8 138 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 BUB1B-PAK6H3BSN5 160 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 TNFRSF11BO00300 401 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 NDUFAB1O14561 156 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 PSPNO60542 156 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 LY86O95711 162 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 H2AFXP16104 143 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 ALOX5APP20292 161 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 CDK2P24941 298 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 ARHGDIBP52566 201 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 CBX1P83916 185 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 MFGE8Q08431 387 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 GRK1Q15835 563 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 ZNF260Q3ZCT1 412 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 TRAPPC6BQ86SZ2 158 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 C5orf56Q8N8D9 126 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 TRMT10AQ8TBZ6 339 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 ZNF596Q8TC21 504 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 MCUR1Q96AQ8 359 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 IL1RAPQ9NPH3 570 aa8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 NKX1-2Q9UD57 310 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-205ENST00000483847 ACOD1A6NK06 481 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 HMGB1P1B2RPK0 211 aaPredicted RBP8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 GMNNO75496 209 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 DHRS3O75911 302 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 TTRP02766 147 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 FRMD6-AS1P0C7T7 363 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 GABRR1P24046 479 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 DUSP1P28562 367 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 SLC35B1P78383 322 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms