RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 MPPED2Q15777 294 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 FAM189A2Q15884 450 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 TAF9Q16594 264 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 BEX5Q5H9J7 111 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 NHLRC3Q5JS37 347 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 HACD4Q5VWC8 232 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 PRAMEF6Q5VXH4 476 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 Q6ZTK2 550 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 SPERTQ8NA61 448 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 C19orf18Q8NEA5 215 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 FCAMRQ8WWV6 532 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 RAB3CQ96E17 227 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 MRPS24Q96EL2 167 aaKnown RBP8.56□□□□□ -1.04
HDAC6-226ENST00000483656 TMEM204Q9BSN7 226 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 PECRQ9BY49 303 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-226ENST00000483656 IL36RNQ9UBH0 155 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 MTFP1Q9UDX5 166 aa8.56□□□□□ -1.04
HDAC6-226ENST00000483656 ANKHD1Q8IWZ3 2542 aaKnown RBP8.56□□□□□ -1.04
HDAC6-226ENST00000483656 ANKRD20A5PA0PJZ0 165 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 MEIS3P1A6NDR6 274 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 TRAPPC2LH3BP13 241 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 NOS1APO75052 506 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 PTTG1O95997 202 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 IGHV1-46P01743 117 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 ACAA1P09110 424 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 GSTP1P09211 210 aaKnown RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 CHATP28329 748 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 RBMXP38159 391 aaKnown RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 PMELP40967 661 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 DEFA1P59665 94 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 DEFA3P59666 94 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 HOXA4Q00056 320 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 MST1LQ2TV78 715 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 ZNF57Q68EA5 555 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 ZNF826PQ6ZT77 177 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 NRARPQ7Z6K4 114 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 OR2Z1Q8NG97 314 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 NUDCD2Q8WVJ2 157 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 POM121Q96HA1 1249 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 MEGF10Q96KG7 1140 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 NEDD4LQ96PU5 975 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 NRIP2Q9BQI9 281 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 SCPEP1Q9HB40 452 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 PCDHB16Q9NRJ7 776 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 POU2F3Q9UKI9 436 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 ST3GAL6Q9Y274 331 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 TEP1Q99973 2627 aaKnown RBP8.55□□□□□ -1.04
HDAC6-226ENST00000483656 FLNCQ14315 2725 aa8.55□□□□□ -1.04
HDAC6-226ENST00000483656 LYRM1O43325 122 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 SPRY3O43610 288 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 RBBP9O75884 186 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 CYB5AP00167 134 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 LPLP06858 475 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 RNF224P0DH78 156 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 IGFBP2P18065 325 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 BTCP35070 178 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 KIR2DL3P43628 341 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 ZNF81P51508 661 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 SNU13P55769 128 aaKnown RBP8.54□□□□□ -1.04
HDAC6-226ENST00000483656 SELENOVP59797 346 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 PNLIPRP3Q17RR3 467 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 TRIM16LQ309B1 348 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 WDR82Q6UXN9 313 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 C6orf201Q7Z4U5 140 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 FAM58AQ8N1B3 248 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 TOMM5Q8N4H5 51 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 MINDY2Q8NBR6 621 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 POC1AQ8NBT0 407 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 ELMOD3Q96FG2 381 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 PLK3Q9H4B4 646 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 HES4Q9HCC6 221 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 UFSP2Q9NUQ7 469 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 NKIRAS2Q9NYR9 191 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 HSF4Q9ULV5 492 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 ANAPC10Q9UM13 185 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 RNF115Q9Y4L5 304 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 CACNG2Q9Y698 323 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 TENM4Q6N022 2769 aa8.54□□□□□ -1.04
HDAC6-226ENST00000483656 PLSCR5A0PG75 271 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A10PA6NDY2 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A18PA6NE21 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A16PA6NEW6 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A20PA6NIJ5 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A8PA6NJQ4 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A7PA6NKC0 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A22PA8MWA6 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A12PA8MX19 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A5PA8MXJ8 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A23PA8MXZ1 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 PYCARD-AS1I3L0S3 204 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 WNT9BO14905 357 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 CA11O75493 328 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FCER2P06734 321 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 ADH4P08319 380 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A15PP0C7V4 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A13PP0C7W8 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAM90A14PP0C7W9 464 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms