RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CGB3P0DN86 165 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 CGB7P0DN87 165 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 PTHLHP12272 177 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 GZMAP12544 262 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 CSRP1P21291 193 aaKnown RBP0.79□□□□□ -2.28
KDM1A-204ENST00000481879 LGALS7P47929 136 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 CLDN8P56748 225 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 GBE1Q04446 702 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 FOXF1Q12946 379 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 RAB11BQ15907 218 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 ZNF773Q6PK81 442 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 Q8NAQ8 132 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 BBOF1Q8ND07 529 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 OR10D4PQ8NGN7 298 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 OR10Z1Q8NGY1 313 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 NT5CQ8TCD5 201 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 TCP10LQ8TDR4 215 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 TFGQ92734 400 aaPredicted RBP0.79□□□□□ -2.28
KDM1A-204ENST00000481879 UBE2WQ96B02 151 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 ZNF707Q96C28 371 aaPredicted RBP0.79□□□□□ -2.28
KDM1A-204ENST00000481879 SMIM8Q96KF7 97 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 OR8B2Q96RD0 313 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 SHCBP1LQ9BZQ2 653 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 RBM22Q9NW64 420 aaKnown RBP eCLIP0.79□□□□□ -2.28
KDM1A-204ENST00000481879 OR5V1Q9UGF6 321 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 ZNF337Q9Y3M9 751 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 MROH5Q6ZUA9 1318 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 SVILO95425 2214 aa0.79□□□□□ -2.28
KDM1A-204ENST00000481879 A0A1B0GU33 70 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 LOC389332A0A1B0GUA5 103 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 GMNCA6NCL1 334 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 CENPXA8MT69 81 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 LEUTXA8MZ59 168 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 PSIP1O75475 530 aaKnown RBP0.78□□□□□ -2.28
KDM1A-204ENST00000481879 PRB1P04280 392 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 P0DMU3 169 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 FAM231AP0DMU4 169 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 FAM231CP0DMU5 169 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 ZNF22P17026 224 aaPredicted RBP0.78□□□□□ -2.28
KDM1A-204ENST00000481879 ST3GAL4Q11206 333 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 SSX1Q16384 188 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 BCL2A1Q16548 175 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 NDUFAF6Q330K2 333 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 ZNF404Q494X3 552 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 FAM27D1Q5T7N8 215 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 PIP5KL1Q5T9C9 394 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 CYHR1Q6ZMK1 362 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 Q6ZQT7 251 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 MRPL21Q7Z2W9 205 aaKnown RBP0.78□□□□□ -2.28
KDM1A-204ENST00000481879 OR2W3Q7Z3T1 314 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 DPPA2Q7Z7J5 298 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 SETD3Q86TU7 594 aaPredicted RBP0.78□□□□□ -2.28
KDM1A-204ENST00000481879 CYP4Z2PQ8N1L4 340 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 RPRMLQ8N4K4 120 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 BPIFB6Q8NFQ5 453 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 UBA3Q8TBC4 463 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 ZFAND1Q8TCF1 268 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 C22orf15Q8WYQ4 148 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 RAD51AP1Q96B01 352 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 METTL26Q96S19 204 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 COA1Q9GZY4 146 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 CHRNA10Q9GZZ6 450 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 ARMC7Q9H6L4 198 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 C6orf50Q9HD87 102 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 MRPL16Q9NX20 251 aaKnown RBP0.78□□□□□ -2.28
KDM1A-204ENST00000481879 RBM12B-AS1Q9P1G2 102 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 BRD4O60885 1362 aaPredicted RBP0.78□□□□□ -2.28
KDM1A-204ENST00000481879 PLEKHG2Q9H7P9 1386 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 SSH2Q76I76 1423 aa0.78□□□□□ -2.28
KDM1A-204ENST00000481879 PRR14LQ5THK1 2151 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 CACNA1GO43497 2377 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 LOC100653049A0A140TA62 436 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 ZNF701M0R085 212 aaPredicted RBP0.77□□□□□ -2.29
KDM1A-204ENST00000481879 M0R1B8 84 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 PSCAO43653 123 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 SLC37A4O43826 429 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 KRT34O76011 436 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 IMPA1P29218 277 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 CRABP2P29373 138 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 DAOAP59103 153 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 RPL31P62899 125 aaKnown RBP0.77□□□□□ -2.29
KDM1A-204ENST00000481879 SLC35B1P78383 322 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 DEFB103AP81534 67 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 CLLU1OSQ5K130 101 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 NOXRED1Q6NXP6 359 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 TCF24Q7RTU0 167 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 TCF23Q7RTU1 214 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 LINC00596Q86U02 117 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 HS3ST5Q8IZT8 346 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 ZNF567Q8N184 647 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 OR51A7Q8NH64 312 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 QKIQ96PU8 341 aaKnown RBP eCLIP0.77□□□□□ -2.29
KDM1A-204ENST00000481879 TSSK6Q9BXA6 273 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 ZNF436Q9C0F3 470 aaPredicted RBP0.77□□□□□ -2.29
KDM1A-204ENST00000481879 IQCGQ9H095 443 aaKnown RBP0.77□□□□□ -2.29
KDM1A-204ENST00000481879 SLC38A1Q9H2H9 487 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 KIR3DX1Q9H7L2 352 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 ZNF286AQ9HBT8 521 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 TFR2Q9UP52 801 aa0.77□□□□□ -2.29
KDM1A-204ENST00000481879 KPTNQ9Y664 436 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms