RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CITED1Q99966 193 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 COMMD4Q9H0A8 199 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 MMP27Q9H306 513 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 TNFRSF19Q9NS68 423 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 PITPNC1Q9UKF7 332 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 GMPPBQ9Y5P6 360 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 NBEAL1Q6ZS30 2694 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 TRBV2A0A0J9YWF9 115 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 TMEM212A6NML5 194 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 SYNGR1O43759 233 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 MT-ND2P03891 347 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 OMGP23515 440 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 PEX2P28328 305 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 C2orf68Q2NKX9 166 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 SSX6Q7RTT6 188 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 CD177Q8N6Q3 437 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 CHST4Q8NCG5 386 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 OR2G2Q8NGZ5 317 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 LINC01006Q8NI28 216 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 TRMT10AQ8TBZ6 339 aaKnown RBP9.36□□□□□ -0.91
CCM2-213ENST00000480658 EMG1Q92979 244 aaKnown RBP9.36□□□□□ -0.91
CCM2-213ENST00000480658 UBE2FQ969M7 185 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 SNX22Q96L94 193 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 ZNF714Q96N38 554 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 OPALINQ96PE5 141 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 MBOAT4Q96T53 435 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 RPL36Q9Y3U8 105 aaKnown RBP9.36□□□□□ -0.91
CCM2-213ENST00000480658 LINC00312Q9Y6C7 94 aa9.36□□□□□ -0.91
CCM2-213ENST00000480658 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ALX3O95076 343 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ALDOBP05062 364 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ZNF728P0DKX0 622 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 AZGP1P25311 298 aaKnown RBP9.35□□□□□ -0.91
CCM2-213ENST00000480658 MTCP1P56278 107 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 EDDM3BP56851 147 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 COL10A1Q03692 680 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ZNF85Q03923 595 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 IL18R1Q13478 541 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 MED21Q13503 144 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 KPNB1Q14974 876 aaKnown RBP9.35□□□□□ -0.91
CCM2-213ENST00000480658 ZNF146Q15072 292 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 UBE2V2Q15819 145 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 TAF9Q16594 264 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ODF4Q2M2E3 257 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 TMEM200BQ69YZ2 307 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 OR52W1Q6IF63 320 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 SLC25A26Q70HW3 274 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 SAXO1Q8IYX7 474 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 PRSS35Q8N3Z0 413 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 CBR4Q8N4T8 237 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ZNF676Q8N7Q3 588 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 OR5D14Q8NGL3 314 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 OR13C3Q8NGS6 347 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 OR2T6Q8NHC8 308 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 STMN2Q93045 179 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 CREB3L1Q96BA8 519 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 MALSU1Q96EH3 234 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 NPFFR1Q9GZQ6 430 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 GAL3ST2Q9H3Q3 398 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 ABCB10Q9NRK6 738 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 C19orf12Q9NSK7 152 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 FBLN5Q9UBX5 448 aa9.35□□□□□ -0.91
CCM2-213ENST00000480658 EXOGQ9Y2C4 368 aaKnown RBP9.35□□□□□ -0.91
CCM2-213ENST00000480658 SOX21Q9Y651 276 aaPredicted RBP9.35□□□□□ -0.91
CCM2-213ENST00000480658 C17orf98A8MV24 154 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 H3BUX3 64 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 J3QRE1 110 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 SH2D1BO14796 132 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 MGST3O14880 152 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 MAGEB3O15480 346 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 MAGEB4O15481 346 aaPredicted RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 ENTPD6O75354 484 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 ZNF737O75373 536 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 HAND1O96004 215 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 CD2P06729 351 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 DBTP11182 482 aaKnown RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 ATF1P18846 271 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 ERP29P30040 261 aaKnown RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 GABRA5P31644 462 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 POLR2IP36954 125 aaKnown RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 ELF3P78545 371 aaPredicted RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 RELBQ01201 579 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 GALEQ14376 348 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 TP53I3Q53FA7 332 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 MINOS1Q5TGZ0 78 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 ANGPTL5Q86XS5 388 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 SERPINA12Q8IW75 414 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 FAM58AQ8N1B3 248 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 OR11H6Q8NGC7 330 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 SLAMF9Q96A28 289 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 C4orf36Q96KX1 117 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 SSX3Q99909 188 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 ALG8Q9BVK2 526 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 TCF7L1Q9HCS4 588 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms