RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TCF19Q9Y242 345 aa15.22■□□□□ 0.03
ABCF3-214ENST00000480562 ODF3BA8MYP8 253 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 SYT7O43581 403 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 PRB2P02812 416 aaPredicted RBP15.21■□□□□ 0.03
ABCF3-214ENST00000480562 CHRM2P08172 466 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 ATP6AP1Q15904 470 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 SSX2Q16385 188 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 KDM4DQ6B0I6 523 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 GDPD3Q7L5L3 318 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 OR13D1Q8NGV5 346 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 CEP19Q96LK0 163 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 ABCB10Q9NRK6 738 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 SERTAD4Q9NUC0 356 aa15.21■□□□□ 0.03
ABCF3-214ENST00000480562 PLXNB1O43157 2135 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 A0A1W2PQL4 384 aaPredicted RBP15.2■□□□□ 0.02
ABCF3-214ENST00000480562 TMEM82A0PJX8 343 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 A6NDX4 124 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 JUNBP17275 347 aaPredicted RBP15.2■□□□□ 0.02
ABCF3-214ENST00000480562 DYNC1I2Q13409 638 aaKnown RBP15.2■□□□□ 0.02
ABCF3-214ENST00000480562 EDDM3AQ14507 147 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 NSUN5P1Q3KNT7 163 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 SAMD5Q5TGI4 173 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 ZNF626Q68DY1 528 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 TCF23Q7RTU1 214 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 FOXRED1Q96CU9 486 aaPredicted RBP15.2■□□□□ 0.02
ABCF3-214ENST00000480562 MALSU1Q96EH3 234 aa15.2■□□□□ 0.02
ABCF3-214ENST00000480562 WARS2Q9UGM6 360 aaKnown RBP15.2■□□□□ 0.02
ABCF3-214ENST00000480562 TBL2Q9Y4P3 447 aaKnown RBP15.2■□□□□ 0.02
ABCF3-214ENST00000480562 METTL15A6NJ78 407 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 FBXO24O75426 580 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 IGHV1-8P0DP01 117 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 CD28P10747 220 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 POLR2IP36954 125 aaKnown RBP15.19■□□□□ 0.02
ABCF3-214ENST00000480562 FUT6P51993 359 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 CNN3Q15417 329 aaKnown RBP15.19■□□□□ 0.02
ABCF3-214ENST00000480562 SLC25A26Q70HW3 274 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 AMIGO2Q86SJ2 522 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 EGFL6Q8IUX8 553 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 OR8H2Q8N162 312 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 TPRX1Q8N7U7 411 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 OR10H4Q8NGA5 316 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 OR11H6Q8NGC7 330 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 RPS4Y2Q8TD47 263 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 BCAS4Q8TDM0 211 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 ADI1Q9BV57 179 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 GABARAPL1Q9H0R8 117 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 IL36RNQ9UBH0 155 aa15.19■□□□□ 0.02
ABCF3-214ENST00000480562 IGHA1P01876 353 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 RBP4P02753 201 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 OR2T7P0C7T2 308 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 HTR1FP30939 366 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 KPRPQ5T749 579 aaPredicted RBP15.18■□□□□ 0.02
ABCF3-214ENST00000480562 ZDHHC13Q8IUH4 622 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 RDH10Q8IZV5 341 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 Q8N2B8 174 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 PRSS35Q8N3Z0 413 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 DTX3Q8N9I9 347 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 OR52N4Q8NGI2 321 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 EMG1Q92979 244 aaKnown RBP15.18■□□□□ 0.02
ABCF3-214ENST00000480562 BORCS8Q96FH0 119 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 SNX22Q96L94 193 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 ZNF714Q96N38 554 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 OR5M11Q96RB7 305 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 CIB1Q99828 191 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 CDCA4Q9BXL8 241 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 CHST5Q9GZS9 411 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 NOTCH3Q9UM47 2321 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 DSCAML1Q8TD84 2053 aa15.18■□□□□ 0.02
ABCF3-214ENST00000480562 GATBO75879 557 aaKnown RBP15.17■□□□□ 0.02
ABCF3-214ENST00000480562 HAND1O96004 215 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 FASP25445 335 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 DUSP1P28562 367 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 ACTA2P62736 377 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 ACTG2P63267 376 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 ACTC1P68032 377 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 ACTA1P68133 377 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 Q6ZS46 218 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 CHST6Q9GZX3 395 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 HILPDAQ9Y5L2 63 aa15.17■□□□□ 0.02
ABCF3-214ENST00000480562 DNAH3Q8TD57 4116 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 LOC107986453A0A1B0GWG9 222 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 hADV38S2A0JD32 116 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 SULT1C4O75897 302 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 SERPINA3P01011 423 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 CALCBP10092 127 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 GABRR1P24046 479 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 ATP6V1E1P36543 226 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 KIR3DL2P43630 455 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 NPBWR2P48146 333 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 SNU13P55769 128 aaKnown RBP15.16■□□□□ 0.02
ABCF3-214ENST00000480562 OR12D2P58182 307 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 MEF2CQ06413 473 aaPredicted RBP15.16■□□□□ 0.02
ABCF3-214ENST00000480562 GRK1Q15835 563 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 TP53I3Q53FA7 332 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 ZNF676Q8N7Q3 588 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 CITED2Q99967 270 aaPredicted RBP15.16■□□□□ 0.02
ABCF3-214ENST00000480562 PRSS22Q9GZN4 317 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 MMP28Q9H239 520 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 RIBC2Q9H4K1 309 aa15.16■□□□□ 0.02
ABCF3-214ENST00000480562 RBFOX1Q9NWB1 397 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms