RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CFHR2P36980 270 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 NR4A2P43354 598 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 PTH2RP49190 550 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 PPP5CP53041 499 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 RBM11P57052 281 aaKnown RBP14.83□□□□□ -0.04
UPF3A-206ENST00000480362 TAS2R20P59543 309 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 ZNF79Q15937 498 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 TAF9Q16594 264 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 PYDC2Q56P42 97 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 PYHIN1Q6K0P9 492 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 CHST4Q8NCG5 386 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 OR56B1Q8NGI3 324 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 OR10Z1Q8NGY1 313 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 ABHD1Q96SE0 405 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 CLEC4MQ9H2X3 399 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-206ENST00000480362 SAP30LQ9HAJ7 183 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 TREM2Q9NZC2 230 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 PPP1R3CQ9UQK1 317 aa14.83□□□□□ -0.04
UPF3A-206ENST00000480362 CHD3Q12873 2000 aaKnown RBP14.82□□□□□ -0.04
UPF3A-206ENST00000480362 GEMIN2O14893 280 aaKnown RBP14.82□□□□□ -0.04
UPF3A-206ENST00000480362 WNT9BO14905 357 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 HLA-DQB1P01920 261 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 GLRA1P23415 457 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 COL8A1P27658 744 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 CD40LGP29965 261 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 PITPNAQ00169 270 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 PDCD1Q15116 288 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 BOLLQ8N9W6 283 aaKnown RBP14.82□□□□□ -0.04
UPF3A-206ENST00000480362 OR11L1Q8NGX0 322 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 Q8TCH9 128 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 SRRQ9GZT4 340 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 HES4Q9HCC6 221 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 RNF7Q9UBF6 113 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 IL36RNQ9UBH0 155 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 RABL2AQ9UBK7 228 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-206ENST00000480362 RABL2BQ9UNT1 228 aa14.82□□□□□ -0.04
UPF3A-206ENST00000480362 FOXI3A8MTJ6 420 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-206ENST00000480362 SRRM5B3KS81 715 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 TPPPO94811 219 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 LHBP01229 141 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 HPXP02790 462 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 EGR1P18146 543 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 DUSP1P28562 367 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 BLVRBP30043 206 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-206ENST00000480362 MNDAP41218 407 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 TMEM50BP56557 158 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 HOXA4Q00056 320 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-206ENST00000480362 NHLRC3Q5JS37 347 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 SNX29P2Q8IUI4 249 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 GCSAMQ8N6F7 178 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 RAB3CQ96E17 227 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 POM121Q96HA1 1249 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 SDHCQ99643 169 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-206ENST00000480362 NUDT16L1Q9BRJ7 211 aaKnown RBP14.81□□□□□ -0.04
UPF3A-206ENST00000480362 CACNG6Q9BXT2 260 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 RAB1BQ9H0U4 201 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 WDR13Q9H1Z4 485 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 PLEKHF2Q9H8W4 249 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 RASL12Q9NYN1 266 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 RAI1Q7Z5J4 1906 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-206ENST00000480362 ROS1P08922 2347 aa14.81□□□□□ -0.04
UPF3A-206ENST00000480362 USP9XQ93008 2570 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-206ENST00000480362 ARFGEF3Q5TH69 2177 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 PTHLHP12272 177 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 IRF2P14316 349 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 ZNF260Q3ZCT1 412 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 CDNFQ49AH0 187 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 SIGIRRQ6IA17 410 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 ACP7Q6ZNF0 438 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 Q6ZTK2 550 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 RTN4RL2Q86UN3 420 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 TGIF2LYQ8IUE0 185 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 ZNF295-AS1Q8N0V1 137 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 GDPD1Q8N9F7 314 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 C15orf40Q8WUR7 153 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 SEH1LQ96EE3 360 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 ZMAT3Q9HA38 289 aaKnown RBP14.8□□□□□ -0.04
UPF3A-206ENST00000480362 ZNF581Q9P0T4 197 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 CACNG2Q9Y698 323 aa14.8□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A10PA6NDY2 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A18PA6NE21 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A16PA6NEW6 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A20PA6NIJ5 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A8PA6NJQ4 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A7PA6NKC0 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A22PA8MWA6 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A12PA8MX19 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A5PA8MXJ8 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A23PA8MXZ1 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 CYB5R3P00387 301 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A15PP0C7V4 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A13PP0C7W8 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A14PP0C7W9 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FAM90A24PP0C7X0 464 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 GNB3P16520 340 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 SCN1BQ07699 218 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 IL13RA2Q14627 380 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 ZNF181Q2M3W8 571 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 PLAC9Q5JTB6 97 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 FIP1L1Q6UN15 594 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms