RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 WDR86Q86TI4 376 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 MOGAT3Q86VF5 341 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 OR5AS1Q8N127 324 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF561Q8N587 486 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 PNLDC1Q8NA58 520 aaKnown RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ZSCAN4Q8NAM6 433 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 POC1AQ8NBT0 407 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF485Q8NCK3 441 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 BHLHE23Q8NDY6 225 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF555Q8NEP9 628 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 OR5D14Q8NGL3 314 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 OR8S1Q8NH09 359 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ANGPTL6Q8NI99 470 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 OR51E1Q8TCB6 317 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 APH1BQ8WW43 257 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 TMEM158Q8WZ71 300 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 AQP3Q92482 292 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 PHYHIPQ92561 330 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 GTF3AQ92664 365 aaKnown RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 LGALS12Q96DT0 336 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 RNFT2Q96EX2 444 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 PELI1Q96FA3 418 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 NUDT16L1Q9BRJ7 211 aaKnown RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 PAPOLGQ9BWT3 736 aaKnown RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 NOX4Q9NPH5 578 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 FKBP14Q9NWM8 211 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF222Q9UK12 451 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 IKZF2Q9UKS7 526 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 HHLA2Q9UM44 414 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 SLC7A11Q9UPY5 501 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 EXOSC1Q9Y3B2 195 aaKnown RBP4.06□□□□□ -1.76
PTCD3-213ENST00000480102 PCDHGB5Q9Y5G0 923 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 CACNG2Q9Y698 323 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 ABCA1O95477 2261 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 MED13LQ71F56 2210 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 COL6A5A8TX70 2615 aa4.06□□□□□ -1.76
PTCD3-213ENST00000480102 SONP18583 2426 aaKnown RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 MXRA5Q9NR99 2828 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.05□□□□□ -1.762e-7■■■□□ 17.5
PTCD3-213ENST00000480102 LOC105371242A0A075B767 164 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1B0GVI7 797 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1W2PPH5 198 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 DAPL1A0PJW8 107 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF879B4DU55 563 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 TRAPPC2LH3BP13 241 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 H3BUI4 141 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 CDIPTO14735 213 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 WNT9BO14905 357 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 OGG1O15527 345 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 HLA-DPB1P04440 258 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 CSN2P05814 226 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 CD37P11049 281 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SLC2A1P11166 492 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 MMP9P14780 707 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 RPS2P15880 293 aaKnown RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ANOS1P23352 680 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 LMO1P25800 156 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ZFP36P26651 326 aaKnown RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 RBP2P50120 134 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 GNB2P62879 340 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 MEF2CQ06413 473 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ALKBH1Q13686 389 aaKnown RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 RCN1Q15293 331 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 MPPED2Q15777 294 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 CARTPTQ16568 116 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SMIM21Q3B7S5 101 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SPRNQ5BIV9 151 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 YIF1BQ5BJH7 314 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 NHLRC3Q5JS37 347 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 WDR38Q5JTN6 314 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SPIN3Q5JUX0 258 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 OTPQ5XKR4 325 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ELP2Q6IA86 826 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ASCL4Q6XD76 172 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 TMPRSS11AQ6ZMR5 421 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 PRIMA1Q86XR5 153 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SERPINA12Q8IW75 414 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 C8orf59Q8N0T1 100 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 PRSS35Q8N3Z0 413 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 DHRSXQ8N5I4 330 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 YIPF7Q8N8F6 280 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SCCPDHQ8NBX0 429 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 CHST4Q8NCG5 386 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 MAPK1IP1LQ8NDC0 245 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 PXT1Q8NFP0 134 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF418Q8TF45 676 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 FAM216AQ8WUB2 273 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 OTULINQ96BN8 352 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 MRI1Q9BV20 369 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 SUCNR1Q9BXA5 334 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 CDCA4Q9BXL8 241 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ANKRD60Q9BZ19 345 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 METTL8Q9H825 291 aaKnown RBP4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ACOXLQ9NUZ1 547 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 TMEM140Q9NV12 185 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 BABAM2Q9NXR7 383 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 DNAJC27Q9NZQ0 273 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF69Q9UC07 566 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 PSORS1C1Q9UIG5 152 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms